Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CHD1O14646 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.64□□□□□ -1.99
CHD1O14646 HMGN2P20-201ENST00000437531 273 ntBASIC2.64□□□□□ -1.99
CHD1O14646 AIG1P1-201ENST00000503376 148 ntBASIC2.64□□□□□ -1.99
CHD1O14646 SMARCE1P4-201ENST00000523647 241 ntBASIC2.64□□□□□ -1.99
CHD1O14646 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CHD1O14646 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.64□□□□□ -1.99
CHD1O14646 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.64□□□□□ -1.99
CHD1O14646 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.64□□□□□ -1.99
CHD1O14646 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.64□□□□□ -1.99
CHD1O14646 RNU1-101P-201ENST00000391171 127 ntBASIC2.63□□□□□ -1.99
CHD1O14646 U3.37-201ENST00000408528 213 ntBASIC2.63□□□□□ -1.99
CHD1O14646 HIGD1AP11-201ENST00000438361 280 ntBASIC2.63□□□□□ -1.99
CHD1O14646 RNU6-1223P-201ENST00000517124 104 ntBASIC2.63□□□□□ -1.99
CHD1O14646 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.63□□□□□ -1.99
CHD1O14646 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.63□□□□□ -1.99
CHD1O14646 AL161713.1-201ENST00000555538 145 ntBASIC2.63□□□□□ -1.99
CHD1O14646 AL137100.2-201ENST00000555786 315 ntBASIC2.63□□□□□ -1.99
CHD1O14646 MIR4419B-201ENST00000577260 68 ntBASIC2.63□□□□□ -1.99
CHD1O14646 AC103810.1-201ENST00000579873 453 ntBASIC2.63□□□□□ -1.99
CHD1O14646 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.63□□□□□ -1.99
CHD1O14646 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHD1O14646 BTBD10P2-201ENST00000404779 676 ntBASIC2.62□□□□□ -1.99
CHD1O14646 RN7SL274P-201ENST00000492268 272 ntBASIC2.62□□□□□ -1.99
CHD1O14646 HAUS1P1-201ENST00000505275 832 ntBASIC2.62□□□□□ -1.99
CHD1O14646 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.62□□□□□ -1.99
CHD1O14646 MTND2P13-201ENST00000577438 1039 ntBASIC2.62□□□□□ -1.99
CHD1O14646 MIR4474-201ENST00000579189 78 ntBASIC2.62□□□□□ -1.99
CHD1O14646 AC011890.2-201ENST00000613393 294 ntBASIC2.62□□□□□ -1.99
CHD1O14646 MIR7973-1-201ENST00000614683 76 ntBASIC2.62□□□□□ -1.99
CHD1O14646 AC095038.3-201ENST00000634439 195 ntBASIC2.62□□□□□ -1.99
CHD1O14646 BX649567.1-201ENST00000642071 1134 ntBASIC2.62□□□□□ -1.99
CHD1O14646 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CHD1O14646 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CHD1O14646 ZNF271P-202ENST00000465539 1970 ntBASIC2.62□□□□□ -1.99
CHD1O14646 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CHD1O14646 DEFB109C-201ENST00000382575 264 ntBASIC2.62□□□□□ -1.99
CHD1O14646 DEFB109B-201ENST00000382656 264 ntBASIC2.62□□□□□ -1.99
CHD1O14646 FNDC3CP-201ENST00000420795 1155 ntBASIC2.62□□□□□ -1.99
CHD1O14646 FABP5P6-201ENST00000510588 409 ntBASIC2.62□□□□□ -1.99
CHD1O14646 AP001804.3-201ENST00000525146 880 ntBASIC2.62□□□□□ -1.99
CHD1O14646 AC016957.1-201ENST00000534895 309 ntBASIC2.62□□□□□ -1.99
CHD1O14646 AL731537.2-201ENST00000561565 951 ntBASIC2.62□□□□□ -1.99
CHD1O14646 AL049779.4-201ENST00000604500 156 ntBASIC2.62□□□□□ -1.99
CHD1O14646 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHD1O14646 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHD1O14646 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHD1O14646 MIRLET7G-201ENST00000362280 84 ntBASIC2.61□□□□□ -1.99
CHD1O14646 AL365400.1-201ENST00000431854 640 ntBASIC2.61□□□□□ -1.99
CHD1O14646 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.61□□□□□ -1.99
CHD1O14646 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.61□□□□□ -1.99
CHD1O14646 IGKV2D-36-201ENST00000518643 226 ntBASIC2.61□□□□□ -1.99
CHD1O14646 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.61□□□□□ -1.99
CHD1O14646 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.61□□□□□ -1.99
CHD1O14646 HSPE1P20-201ENST00000538133 289 ntBASIC2.61□□□□□ -1.99
CHD1O14646 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.61□□□□□ -1.99
CHD1O14646 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.61□□□□□ -1.99
CHD1O14646 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.61□□□□□ -1.99
CHD1O14646 HPVC1-201ENST00000629899 1198 ntBASIC2.61□□□□□ -1.99
CHD1O14646 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHD1O14646 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.6□□□□□ -1.99
CHD1O14646 RPL21P134-201ENST00000453468 483 ntBASIC2.6□□□□□ -1.99
CHD1O14646 AC104472.2-201ENST00000469035 601 ntBASIC2.6□□□□□ -1.99
CHD1O14646 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.6□□□□□ -1.99
CHD1O14646 SEPT7P9-203ENST00000604116 343 ntBASIC2.6□□□□□ -1.99
CHD1O14646 AC012150.2-201ENST00000621300 544 ntBASIC2.6□□□□□ -1.99
CHD1O14646 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHD1O14646 XKRYP4-201ENST00000414395 483 ntBASIC2.59□□□□□ -1.99
CHD1O14646 BX510359.4-201ENST00000423750 193 ntBASIC2.59□□□□□ -1.99
CHD1O14646 AC009965.2-201ENST00000425328 970 ntBASIC2.59□□□□□ -1.99
CHD1O14646 AC022022.1-201ENST00000430304 178 ntBASIC2.59□□□□□ -1.99
CHD1O14646 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.59□□□□□ -1.99
CHD1O14646 XKRYP5-201ENST00000449659 483 ntBASIC2.59□□□□□ -1.99
CHD1O14646 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.59□□□□□ -1.99
CHD1O14646 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.59□□□□□ -1.99
CHD1O14646 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.59□□□□□ -1.99
CHD1O14646 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.59□□□□□ -2
CHD1O14646 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.59□□□□□ -2
CHD1O14646 HMGB1P45-201ENST00000435986 653 ntBASIC2.59□□□□□ -2
CHD1O14646 KATNBL1P3-201ENST00000443475 909 ntBASIC2.59□□□□□ -2
CHD1O14646 OR7L1P-201ENST00000456181 380 ntBASIC2.59□□□□□ -2
CHD1O14646 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
CHD1O14646 AC067838.1-201ENST00000606064 577 ntBASIC2.59□□□□□ -2
CHD1O14646 AL590099.1-201ENST00000615276 138 ntBASIC2.59□□□□□ -2
CHD1O14646 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CHD1O14646 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CHD1O14646 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CHD1O14646 SNORA16.1-201ENST00000364597 132 ntBASIC2.58□□□□□ -2
CHD1O14646 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.58□□□□□ -2
CHD1O14646 MTND2P2-201ENST00000434633 945 ntBASIC2.58□□□□□ -2
CHD1O14646 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.58□□□□□ -2
CHD1O14646 RPL21P39-201ENST00000463605 483 ntBASIC2.58□□□□□ -2
CHD1O14646 AC011979.1-201ENST00000472300 483 ntBASIC2.58□□□□□ -2
CHD1O14646 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.58□□□□□ -2
CHD1O14646 RPL21P93-201ENST00000480465 489 ntBASIC2.58□□□□□ -2
CHD1O14646 AC233702.1-201ENST00000482905 502 ntBASIC2.58□□□□□ -2
CHD1O14646 AC093591.1-201ENST00000491435 481 ntBASIC2.58□□□□□ -2
CHD1O14646 AC034222.1-201ENST00000494052 532 ntBASIC2.58□□□□□ -2
CHD1O14646 AC234775.3-201ENST00000564612 656 ntBASIC2.58□□□□□ -2
CHD1O14646 MIR151B-201ENST00000584249 96 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms