Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX39AO00148 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX39AO00148 AC079089.3-201ENST00000603094 673 ntBASIC3.32□□□□□ -1.88
DDX39AO00148 NUTF2P8-201ENST00000604593 363 ntBASIC3.32□□□□□ -1.88
DDX39AO00148 AL158211.4-201ENST00000606988 584 ntBASIC3.32□□□□□ -1.88
DDX39AO00148 AC004067.1-201ENST00000608733 700 ntBASIC3.32□□□□□ -1.88
DDX39AO00148 AL121652.1-201ENST00000608851 448 ntBASIC3.32□□□□□ -1.88
DDX39AO00148 AC006213.4-201ENST00000616184 634 ntBASIC3.32□□□□□ -1.88
DDX39AO00148 AC109809.1-201ENST00000619665 545 ntBASIC3.32□□□□□ -1.88
DDX39AO00148 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.32□□□□□ -1.88
DDX39AO00148 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DDX39AO00148 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX39AO00148 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DDX39AO00148 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX39AO00148 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX39AO00148 SNORA80A-201ENST00000363922 136 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 RNU6-343P-201ENST00000364709 104 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
DDX39AO00148 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
DDX39AO00148 RPL23AP29-201ENST00000397284 453 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 AL136310.1-201ENST00000404926 654 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 RNA5SP274-201ENST00000410484 108 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 AL356867.1-201ENST00000429623 299 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX39AO00148 AC002381.1-201ENST00000447049 280 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX39AO00148 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 SETP11-201ENST00000473027 690 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 HSPE1P6-201ENST00000479457 291 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 AC109445.1-201ENST00000512356 383 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX39AO00148 RNU6-150P-201ENST00000516237 95 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 RNU6-714P-201ENST00000516963 103 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX39AO00148 DEFB131D-201ENST00000526803 184 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DDX39AO00148 OR7K1P-201ENST00000546439 926 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 CYCSP2-201ENST00000558168 301 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX39AO00148 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX39AO00148 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
DDX39AO00148 AC091564.4-201ENST00000533934 2194 ntBASIC3.31□□□□□ -1.88
DDX39AO00148 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX39AO00148 U3.11-201ENST00000364476 212 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 RNU6-621P-201ENST00000364752 109 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 Y_RNA.311-201ENST00000365068 96 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX39AO00148 SNORA18.3-201ENST00000384122 132 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX39AO00148 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.3□□□□□ -1.88
DDX39AO00148 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX39AO00148 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX39AO00148 ZNF886P-201ENST00000450781 723 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 AC010099.1-201ENST00000455434 375 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX39AO00148 AC147055.4-201ENST00000504399 745 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX39AO00148 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX39AO00148 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX39AO00148 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX39AO00148 SNORA31.22-201ENST00000517204 135 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 COX6CP8-201ENST00000522620 226 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX39AO00148 AC090695.1-201ENST00000561269 1222 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX39AO00148 AC005014.3-201ENST00000605985 190 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 AL450489.1-201ENST00000612071 468 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 AL159972.1-201ENST00000625150 448 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX39AO00148 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX39AO00148 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
DDX39AO00148 GABRG2-229ENST00000641017 3628 ntBASIC3.3□□□□□ -1.88
DDX39AO00148 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX39AO00148 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX39AO00148 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DDX39AO00148 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX39AO00148 AL161781.1-201ENST00000354277 403 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 RNU6-97P-201ENST00000363387 104 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 RNA5SP139-201ENST00000364340 117 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 RNU6-359P-201ENST00000365466 108 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 SNORA46-201ENST00000384762 135 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 MIR122-201ENST00000385044 85 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
DDX39AO00148 ERHP2-201ENST00000402323 299 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 MIR1284-201ENST00000408337 120 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 AL592148.1-201ENST00000413568 445 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 OR4K11P-201ENST00000431829 904 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 AC009237.8-201ENST00000445492 379 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 AL162389.1-201ENST00000449233 177 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 SNORD121B-201ENST00000458838 81 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 AC091179.1-201ENST00000461606 579 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 RN7SL633P-201ENST00000488974 297 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 AL049874.1-201ENST00000489560 388 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 AC097462.2-201ENST00000504623 481 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 AC079395.1-201ENST00000510981 262 ntBASIC3.29□□□□□ -1.88
DDX39AO00148 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
DDX39AO00148 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.29□□□□□ -1.88
DDX39AO00148 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.29□□□□□ -1.88
DDX39AO00148 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms