Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MIR3690-201ENST00000580266 75 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 RSL24D1P11-201ENST00000591045 491 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 AP001330.4-201ENST00000604350 154 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 AC112191.3-201ENST00000604371 277 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 AL391813.2-201ENST00000609113 322 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 AL133383.2-201ENST00000622958 2336 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 AC007496.3-201ENST00000624987 3443 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC53A6NM62 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC53A6NM62 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC53A6NM62 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 RNU6-637P-201ENST00000384050 107 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 Y_RNA.553-201ENST00000384670 102 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 SNORD115.1-201ENST00000391109 76 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC53A6NM62 HSPE1P26-201ENST00000405341 275 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 RN7SKP263-201ENST00000411194 309 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 BTF3L4P1-201ENST00000413813 468 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC233728.2-201ENST00000425348 757 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 CYCSP4-201ENST00000429682 331 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AL445584.1-201ENST00000431451 330 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AL049734.2-201ENST00000441066 616 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 MTCO1P19-201ENST00000443487 500 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 HMGN2P7-201ENST00000456186 273 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 HMGN1P18-201ENST00000457642 277 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 SNORD105B-201ENST00000458770 79 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 RPL21P104-201ENST00000464143 478 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 RPL23AP14-201ENST00000468281 468 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 RN7SL442P-201ENST00000473804 320 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 RN7SKP289-201ENST00000517244 295 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC022878.1-201ENST00000530684 149 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC022146.1-201ENST00000595307 847 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC138749.5-201ENST00000611461 208 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AL355810.1-201ENST00000614629 552 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC116165.2-201ENST00000616705 206 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC009159.1-201ENST00000618386 642 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC009268.2-201ENST00000621925 457 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AL161637.1-201ENST00000622380 412 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC243312.2-201ENST00000623340 601 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AL603839.4-201ENST00000624658 1005 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC090582.1-201ENST00000636321 199 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC244258.1-201ENST00000637553 1071 ntBASIC3.67□□□□□ -1.82
LRRC53A6NM62 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LRRC53A6NM62 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC53A6NM62 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC53A6NM62 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC53A6NM62 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC53A6NM62 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 RNU4-91P-201ENST00000364778 135 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC53A6NM62 MIR19A-201ENST00000384878 82 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 Y_RNA.598-201ENST00000410480 95 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 RNU6-516P-201ENST00000411381 104 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 CRYBB2P1-203ENST00000415709 538 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC090774.1-201ENST00000435925 246 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC004866.2-201ENST00000438285 481 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AL121871.1-201ENST00000443413 436 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 USP9YP29-201ENST00000445112 563 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 CEACAMP4-201ENST00000457676 421 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 RNU6-956P-201ENST00000458868 103 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC022483.1-201ENST00000514020 567 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 RN7SKP18-201ENST00000516005 275 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 RNU6-201P-201ENST00000517100 61 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC004024.1-201ENST00000549244 247 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC006362.1-201ENST00000567392 174 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 VN1R85P-201ENST00000601587 426 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC068790.3-201ENST00000602988 553 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC108747.1-201ENST00000609508 535 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms