Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 MRPS17P3-201ENST00000465453 385 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 HMGB1P22-201ENST00000505315 124 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 MIR4775-201ENST00000581168 75 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 SNORD84-203ENST00000584275 78 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL670379.6-201ENST00000603753 252 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL670379.11-201ENST00000604059 253 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC008162.1-201ENST00000604718 254 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL670379.1-201ENST00000604752 252 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL670379.5-201ENST00000605253 252 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL670379.12-201ENST00000605291 253 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL670379.8-201ENST00000605353 252 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL670379.7-201ENST00000605823 252 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC004696.1-201ENST00000614345 607 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 RNA5SP439-201ENST00000617595 124 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC006504.8-201ENST00000621046 635 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AP005264.7-201ENST00000625003 745 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC024614.3-201ENST00000637860 256 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 LINC01355-201ENST00000566551 5444 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC008079.2-201ENST00000623543 20396 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 SNORA23-201ENST00000365128 182 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 RNU6-996P-201ENST00000365438 107 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC110754.1-201ENST00000399740 601 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 OR9R1P-201ENST00000412200 877 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC012498.1-201ENST00000424037 437 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 HMGN2P21-201ENST00000447764 270 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC073415.1-201ENST00000449240 153 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC025164.1-201ENST00000496249 478 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 STMN1P2-201ENST00000508435 439 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 SNORA31.22-201ENST00000517204 135 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 NCAPGP2-201ENST00000557911 754 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC012182.1-201ENST00000570133 895 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 SNRPGP15-201ENST00000600149 222 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 LARP7P1-201ENST00000605576 316 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 uc_338.11-201ENST00000619132 160 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 MIR7975-201ENST00000619350 68 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AC009812.4-201ENST00000569134 1805 ntBASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC85CA6NKD9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RPL7P26-201ENST00000333817 754 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RNU6-76P-201ENST00000384060 104 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RNU6-301P-201ENST00000384277 107 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RNU6-876P-201ENST00000391295 104 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RAP1BP3-201ENST00000407180 549 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 MIR1289-1-201ENST00000408836 144 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 EI24P1-201ENST00000416584 867 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RAC1P6-201ENST00000423911 575 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RWDD4P2-201ENST00000426392 563 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 MTATP6P4-201ENST00000427725 675 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RPL23AP43-201ENST00000446445 471 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RPS24P6-201ENST00000452670 400 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RNU7-182P-201ENST00000459009 62 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC010631.1-201ENST00000474150 156 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC078785.3-201ENST00000476607 425 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RN7SL293P-201ENST00000481765 281 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms