Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 ARPC3P2-201ENST00000457786 533 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 AC096992.1-201ENST00000459808 709 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 AL121917.1-203ENST00000605534 577 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 AC022022.1-201ENST00000430304 178 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 RPS15AP1-201ENST00000457423 391 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.62□□□□□ -2.15
CNOT1A5YKK6 AC087854.1-201ENST00000519706 414 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AC104986.1-201ENST00000517978 436 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AC068714.1-201ENST00000559623 800 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 MIR4421-201ENST00000578133 69 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 SNORD39.2-201ENST00000579995 76 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AC018754.1-201ENST00000607486 925 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AC007560.1-201ENST00000426912 237 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 GZMAP1-201ENST00000503054 631 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 ATG10-AS1-201ENST00000504846 648 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.61□□□□□ -2.15
CNOT1A5YKK6 ABI1P1-201ENST00000603375 1120 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 VIS1.1-201ENST00000610517 203 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 AC073348.1-201ENST00000623002 331 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 MIR6767-201ENST00000637302 66 ntBASIC1.61□□□□□ -2.15
CNOT1A5YKK6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CNOT1A5YKK6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
CNOT1A5YKK6 RNA5SP189-201ENST00000364920 115 ntBASIC1.6□□□□□ -2.15
CNOT1A5YKK6 USP9YP27-201ENST00000418455 438 ntBASIC1.6□□□□□ -2.15
CNOT1A5YKK6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CNOT1A5YKK6 MTND1P18-201ENST00000448191 573 ntBASIC1.6□□□□□ -2.15
CNOT1A5YKK6 KATNBL1P4-201ENST00000503545 918 ntBASIC1.6□□□□□ -2.15
CNOT1A5YKK6 RNA5SP402-201ENST00000517148 110 ntBASIC1.6□□□□□ -2.15
CNOT1A5YKK6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.6□□□□□ -2.15
CNOT1A5YKK6 MIR4512-201ENST00000583257 77 ntBASIC1.6□□□□□ -2.15
CNOT1A5YKK6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.6□□□□□ -2.15
CNOT1A5YKK6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CNOT1A5YKK6 OR4G1P-203ENST00000641984 1631 ntBASIC1.6□□□□□ -2.15
CNOT1A5YKK6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CNOT1A5YKK6 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
CNOT1A5YKK6 RAD23BP2-201ENST00000416003 1207 ntBASIC1.59□□□□□ -2.15
CNOT1A5YKK6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.59□□□□□ -2.15
CNOT1A5YKK6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.59□□□□□ -2.15
CNOT1A5YKK6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.59□□□□□ -2.15
CNOT1A5YKK6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.59□□□□□ -2.15
CNOT1A5YKK6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.59□□□□□ -2.15
CNOT1A5YKK6 RNU7-157P-201ENST00000459600 66 ntBASIC1.59□□□□□ -2.15
CNOT1A5YKK6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.59□□□□□ -2.15
CNOT1A5YKK6 RNU2-58P-201ENST00000516403 183 ntBASIC1.59□□□□□ -2.15
CNOT1A5YKK6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1.59□□□□□ -2.15
CNOT1A5YKK6 AC015720.1-201ENST00000565251 277 ntBASIC1.59□□□□□ -2.15
CNOT1A5YKK6 AC124283.4-201ENST00000581815 456 ntBASIC1.59□□□□□ -2.15
CNOT1A5YKK6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.59□□□□□ -2.15
CNOT1A5YKK6 Z82195.2-201ENST00000612348 18351 ntBASIC1.59□□□□□ -2.15
CNOT1A5YKK6 RNU4-51P-201ENST00000364206 140 ntBASIC1.59□□□□□ -2.16
CNOT1A5YKK6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.59□□□□□ -2.16
CNOT1A5YKK6 EIF1AXP1-201ENST00000419267 435 ntBASIC1.59□□□□□ -2.16
CNOT1A5YKK6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.59□□□□□ -2.16
CNOT1A5YKK6 CLIC4P1-201ENST00000453177 535 ntBASIC1.59□□□□□ -2.16
CNOT1A5YKK6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.59□□□□□ -2.16
CNOT1A5YKK6 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.59□□□□□ -2.16
CNOT1A5YKK6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CNOT1A5YKK6 AC021146.7-201ENST00000509604 775 ntBASIC1.59□□□□□ -2.16
CNOT1A5YKK6 AL359273.1-201ENST00000510918 627 ntBASIC1.59□□□□□ -2.16
CNOT1A5YKK6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.59□□□□□ -2.16
CNOT1A5YKK6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.59□□□□□ -2.16
CNOT1A5YKK6 HPVC1-201ENST00000629899 1198 ntBASIC1.59□□□□□ -2.16
CNOT1A5YKK6 AC007256.1-201ENST00000392253 2765 ntBASIC1.59□□□□□ -2.16
CNOT1A5YKK6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 RPL31P2-201ENST00000413849 377 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 MTCYBP7-201ENST00000419540 1134 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 GTF2IP9-201ENST00000502460 301 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 SNORA31.26-201ENST00000517250 137 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 MTCO3P24-201ENST00000572729 782 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 MIR3618-201ENST00000580330 88 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AC008133.2-201ENST00000624540 351 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AC010680.1-201ENST00000590024 3590 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 U3.37-201ENST00000408528 213 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 RPL39P40-201ENST00000445481 146 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AL157827.1-201ENST00000447622 132 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 RPL7P5-201ENST00000471472 736 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 RPS15AP36-201ENST00000492022 382 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 TBCAP3-201ENST00000512475 312 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 HMGN1P28-201ENST00000521340 364 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AC239860.2-201ENST00000525886 270 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms