Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC66A2RUB6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 MTCO1P9-201ENST00000505577 1534 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 RNU6-432P-201ENST00000384196 109 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 Y_RNA.509-201ENST00000384506 99 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 RN7SKP263-201ENST00000411194 309 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 SDCBPP3-201ENST00000419629 891 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 OR2AS1P-201ENST00000427827 319 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC073415.1-201ENST00000449240 153 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 RPL36AP13-201ENST00000457490 317 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC126389.1-201ENST00000477436 290 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 IGLV2-34-201ENST00000490007 283 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 EIF4EP3-201ENST00000498782 656 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 HMGB1P41-201ENST00000520234 440 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 SUB1P1-201ENST00000524415 382 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC128657.1-201ENST00000549459 145 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC010680.3-201ENST00000604215 520 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC013553.2-201ENST00000604244 589 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 MIR6748-201ENST00000610433 71 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC130324.3-201ENST00000614165 542 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC009233.1-201ENST00000616477 371 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 MIR6853-201ENST00000619642 74 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC100810.6-201ENST00000638068 285 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 AC099654.10-201ENST00000640395 161 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC66A2RUB6 MTCO1P24-201ENST00000515438 1558 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 CPHL1P-201ENST00000461341 3407 ntBASIC4.74□□□□□ -1.65
CCDC66A2RUB6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 RNA5SP307-201ENST00000362863 116 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 RNA5SP443-201ENST00000363083 132 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 Y_RNA.166-201ENST00000363730 102 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 Y_RNA.529-201ENST00000384586 119 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 Y_RNA.535-201ENST00000384612 99 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 SNORA74C-2-201ENST00000411179 201 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC092447.6-201ENST00000414578 210 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC016831.2-201ENST00000417179 352 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 RPL29P29-201ENST00000448725 423 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC007686.1-201ENST00000488511 463 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC093278.1-201ENST00000494700 600 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC135721.1-201ENST00000497954 479 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 RNU6-64P-201ENST00000517119 105 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 MIR486-1-201ENST00000612171 68 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC093838.1-201ENST00000613014 469 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AL603758.1-201ENST00000618654 241 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AL136313.1-201ENST00000624804 202 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 AC112487.2-201ENST00000637950 304 ntBASIC4.73□□□□□ -1.65
CCDC66A2RUB6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCDC66A2RUB6 RPS4XP5-202ENST00000449995 1334 ntBASIC4.72□□□□□ -1.65
CCDC66A2RUB6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC66A2RUB6 OR4G1P-203ENST00000641984 1631 ntBASIC4.72□□□□□ -1.65
CCDC66A2RUB6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC66A2RUB6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms