Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AP005435.4-201ENST00000529514 284 ntBASIC1.63□□□□□ -2.15
AP4S1Q9Y587 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.63□□□□□ -2.15
AP4S1Q9Y587 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.63□□□□□ -2.15
AP4S1Q9Y587 AC103881.1-201ENST00000603476 538 ntBASIC1.63□□□□□ -2.15
AP4S1Q9Y587 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.63□□□□□ -2.15
AP4S1Q9Y587 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
AP4S1Q9Y587 AP006437.1-201ENST00000641440 3685 ntBASIC1.63□□□□□ -2.15
AP4S1Q9Y587 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
AP4S1Q9Y587 ZNF355P-201ENST00000427301 3216 ntBASIC1.62□□□□□ -2.15
AP4S1Q9Y587 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
AP4S1Q9Y587 RNU6-244P-201ENST00000391028 104 ntBASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AL079342.1-201ENST00000401460 267 ntBASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AC009414.1-201ENST00000427200 443 ntBASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AL513321.1-201ENST00000441175 761 ntBASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AL390838.2-201ENST00000602394 274 ntBASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AL513477.2-201ENST00000607858 568 ntBASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.62□□□□□ -2.15
AP4S1Q9Y587 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.62□□□□□ -2.15
AP4S1Q9Y587 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
AP4S1Q9Y587 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
AP4S1Q9Y587 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 RNU6-193P-201ENST00000410977 107 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AL451062.2-201ENST00000427515 271 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 Z98742.2-201ENST00000431564 187 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AL645568.3-201ENST00000433683 316 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 MTCYBP34-201ENST00000439552 670 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 RPL31P41-201ENST00000477967 372 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 SETP6-201ENST00000479329 568 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 RPL9P6-201ENST00000492764 598 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC106872.3-201ENST00000495104 446 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 OR52A4P-203ENST00000498233 1014 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC087481.2-201ENST00000565492 330 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC090751.1-201ENST00000566966 267 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 SDR42E1P2-201ENST00000614861 481 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 SDR42E1P4-201ENST00000620894 481 ntBASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.61□□□□□ -2.15
AP4S1Q9Y587 AL136360.1-201ENST00000503377 1900 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 RPL7P27-201ENST00000403775 720 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 CIR1P3-201ENST00000405137 479 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 RNA5SP498-201ENST00000411342 120 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC008173.1-201ENST00000418901 264 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 MTCO3P4-201ENST00000419236 787 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 RPS29P11-201ENST00000496507 171 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC020699.1-201ENST00000505161 445 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 RN7SKP283-201ENST00000517197 270 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC118942.1-201ENST00000529674 1035 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC074029.1-201ENST00000552531 1044 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 MIR1273D-201ENST00000577266 86 ntBASIC1.6□□□□□ -2.15
AP4S1Q9Y587 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.6□□□□□ -2.15
AP4S1Q9Y587 SGO1P2-201ENST00000429458 1589 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 ZNF90P1-201ENST00000480493 1951 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AL049737.1-201ENST00000413920 1403 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 U8.3-201ENST00000363321 132 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 MIR491-201ENST00000384877 84 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 PTGES3P2-201ENST00000407942 482 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 MIR1250-201ENST00000408098 113 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 POLHP1-201ENST00000411806 470 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AC096664.2-201ENST00000411843 406 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 RPL23AP39-201ENST00000415533 405 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AC004866.2-201ENST00000438285 481 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 RNF2P1-201ENST00000442955 1010 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms