Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 RNU6-28P-201ENST00000362378 107 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 RNU6-1042P-201ENST00000384204 107 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 DEFB108C-201ENST00000400154 252 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 RNU6-648P-201ENST00000410190 107 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC099677.1-201ENST00000420575 175 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC005326.1-201ENST00000429197 123 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC109583.1-201ENST00000432156 268 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AL662791.1-201ENST00000441992 928 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 ELOCP30-201ENST00000447108 299 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC005297.2-201ENST00000450430 606 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 RN7SKP289-201ENST00000517244 295 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 MTND4LP18-201ENST00000526864 291 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AP002453.2-201ENST00000533503 320 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 MIR4307-201ENST00000582802 84 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 MIR548AB-201ENST00000584917 84 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC080078.2-201ENST00000603766 501 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC011816.2-201ENST00000607089 556 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC015540.1-201ENST00000615828 501 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AC026585.1-201ENST00000619582 524 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 AL359740.1-201ENST00000624340 592 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.65□□□□□ -1.51
CDK11AQ9UQ88 MTND4P5-201ENST00000435821 1374 ntBASIC5.65□□□□□ -1.51
CDK11AQ9UQ88 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 AL161781.1-201ENST00000354277 403 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 Y_RNA.359-201ENST00000365498 102 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 HLFP1-201ENST00000402375 499 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 RPS24P1-201ENST00000438550 371 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 MTND1P27-201ENST00000451117 902 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 HMGB1P15-201ENST00000453854 435 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 RPL21P10-201ENST00000463521 490 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 CDC42P4-201ENST00000510507 563 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 AC010625.1-201ENST00000511296 403 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 AF131216.2-201ENST00000512316 564 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 OR4P1P-201ENST00000530808 1136 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 AC020914.4-201ENST00000597690 277 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 MIR8058-201ENST00000615737 89 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK11AQ9UQ88 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AL353746.1-201ENST00000566293 6881 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 SNORA75-201ENST00000384158 137 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 MIR634-201ENST00000385208 97 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 HMGN2P16-201ENST00000456802 261 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 HMGB1P25-201ENST00000468402 607 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AC078785.3-201ENST00000476607 425 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AP001025.2-201ENST00000490908 477 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AC034222.1-201ENST00000494052 532 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 TXNP6-201ENST00000510190 310 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 RNU2-27P-201ENST00000516185 142 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AL139174.1-201ENST00000531489 886 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AC008011.1-201ENST00000545989 227 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AC011611.1-201ENST00000552179 197 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 TPMTP1-201ENST00000592307 737 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 HMGB1P50-201ENST00000605814 607 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms