Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC096920.1-201ENST00000423991 241 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 RPS24P8-201ENST00000431490 402 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 RPL21P89-201ENST00000444021 467 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC104687.1-201ENST00000485829 412 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC116562.3-201ENST00000506136 177 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AP003497.1-201ENST00000528472 562 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC068587.5-201ENST00000528506 175 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 MIR4270-201ENST00000581799 70 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 Z83818.1-201ENST00000603584 150 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC020910.3-201ENST00000603701 874 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC008162.1-201ENST00000604718 254 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC072026.1-201ENST00000605023 201 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AL670379.4-201ENST00000605279 254 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC074029.4-201ENST00000624796 1859 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AC027228.2-201ENST00000567141 2154 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AC004817.4-201ENST00000602396 3625 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-1059P-201ENST00000363752 98 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 Y_RNA.183-201ENST00000363882 113 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-343P-201ENST00000364709 104 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 OR52E6-202ENST00000379946 954 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 Y_RNA.383-201ENST00000383855 97 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-842P-201ENST00000384269 107 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 DHFRP6-201ENST00000401776 268 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 RPL21P67-201ENST00000402896 478 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 RPL7P37-201ENST00000425095 738 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AC002381.1-201ENST00000447049 280 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AC104472.2-201ENST00000469035 601 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AC015724.1-201ENST00000478577 156 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 TMEM251P1-201ENST00000503717 318 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 SERF1AP1-201ENST00000514575 187 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AF186190.1-201ENST00000517470 480 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 LSM3P2-201ENST00000551246 273 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 HMGN2P28-201ENST00000606102 262 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 MIR6780A-201ENST00000615089 68 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AL590240.4-201ENST00000616908 390 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AP000346.3-201ENST00000622821 210 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 U6.106-201ENST00000636360 105 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 KPNA2P2-201ENST00000419546 1489 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 AC022893.2-201ENST00000564832 3296 ntBASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDZRN3Q9UPQ7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 RNA5SP105-201ENST00000391123 113 ntBASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AL583834.1-201ENST00000406943 343 ntBASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 RNU2-50P-201ENST00000410494 143 ntBASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AC012065.2-201ENST00000421295 375 ntBASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 PSMC1P13-201ENST00000458195 985 ntBASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AC026979.1-201ENST00000492525 396 ntBASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 ENPP7P11-201ENST00000505915 627 ntBASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AC021006.3-201ENST00000530771 192 ntBASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms