Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 FO393414.1-201ENST00000428697 1184 ntBASIC2.16□□□□□ -2.06
SCN11AQ9UI33 RPL21P131-201ENST00000497298 483 ntBASIC2.16□□□□□ -2.06
SCN11AQ9UI33 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN11AQ9UI33 RPL37P25-201ENST00000507308 276 ntBASIC2.16□□□□□ -2.06
SCN11AQ9UI33 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.16□□□□□ -2.06
SCN11AQ9UI33 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.16□□□□□ -2.06
SCN11AQ9UI33 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN11AQ9UI33 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN11AQ9UI33 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SCN11AQ9UI33 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SCN11AQ9UI33 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SCN11AQ9UI33 Y_RNA.112-201ENST00000363250 102 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 SNORD56.5-201ENST00000364281 72 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 SNORA16.1-201ENST00000364597 132 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 CCNB2P1-201ENST00000399411 1150 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 RPL31P2-201ENST00000413849 377 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 RPS7P9-201ENST00000414704 586 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 AL137159.1-201ENST00000452808 512 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 AC010625.1-201ENST00000511296 403 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 RNA5SP82-201ENST00000516707 92 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.15□□□□□ -2.06
SCN11AQ9UI33 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.15□□□□□ -2.06
SCN11AQ9UI33 AC013444.2-201ENST00000603317 787 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 AC019159.1-201ENST00000605094 187 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 HSPE1P14-201ENST00000605812 302 ntBASIC2.15□□□□□ -2.06
SCN11AQ9UI33 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SCN11AQ9UI33 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SCN11AQ9UI33 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.15□□□□□ -2.07
SCN11AQ9UI33 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SCN11AQ9UI33 AC079203.1-201ENST00000487972 404 ntBASIC2.15□□□□□ -2.07
SCN11AQ9UI33 RN7SKP40-201ENST00000517211 242 ntBASIC2.15□□□□□ -2.07
SCN11AQ9UI33 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN11AQ9UI33 MYL12BP1-201ENST00000569826 507 ntBASIC2.15□□□□□ -2.07
SCN11AQ9UI33 MIR3199-1-201ENST00000582434 88 ntBASIC2.15□□□□□ -2.07
SCN11AQ9UI33 AC006249.1-201ENST00000621223 471 ntBASIC2.15□□□□□ -2.07
SCN11AQ9UI33 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 RNU6-392P-201ENST00000364926 101 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 MCTS2P-201ENST00000394552 546 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 AC009237.2-201ENST00000421358 284 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 SSXP4-201ENST00000451349 245 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 OR7L1P-201ENST00000456181 380 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 AC080013.2-201ENST00000460866 323 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 AC090255.1-201ENST00000495779 349 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 SEM1P1-201ENST00000506694 209 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 MTCYBP37-201ENST00000510642 1133 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 uc_338.5-201ENST00000611839 155 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.14□□□□□ -2.07
SCN11AQ9UI33 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN11AQ9UI33 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 RNA5SP325-201ENST00000363756 130 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC234782.4-201ENST00000417646 1048 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 RPS6P14-201ENST00000425165 719 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 SUMO1P4-201ENST00000429430 302 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 MOB1AP2-201ENST00000446060 614 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AL121594.1-201ENST00000475906 575 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 MIR3690-201ENST00000580266 75 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AL645939.4-201ENST00000604495 135 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC233981.2-201ENST00000611524 1614 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 ZNF876P-202ENST00000398732 1485 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AF279873.1-201ENST00000523393 313 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC007375.1-201ENST00000554513 578 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC068714.1-201ENST00000559623 800 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 ACTR3BP3-201ENST00000565577 979 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 AC103987.3-201ENST00000582071 292 ntBASIC2.13□□□□□ -2.07
SCN11AQ9UI33 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN11AQ9UI33 RNA5SP27-201ENST00000363839 119 ntBASIC2.12□□□□□ -2.07
SCN11AQ9UI33 RNU6-53P-201ENST00000365367 106 ntBASIC2.12□□□□□ -2.07
SCN11AQ9UI33 PRELID3BP11-201ENST00000414230 479 ntBASIC2.12□□□□□ -2.07
SCN11AQ9UI33 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.12□□□□□ -2.07
SCN11AQ9UI33 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SCN11AQ9UI33 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN11AQ9UI33 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN11AQ9UI33 PIGFP3-201ENST00000441918 722 ntBASIC2.12□□□□□ -2.07
SCN11AQ9UI33 AL031659.1-201ENST00000447075 539 ntBASIC2.12□□□□□ -2.07
SCN11AQ9UI33 TPT1P14-201ENST00000448018 505 ntBASIC2.12□□□□□ -2.07
SCN11AQ9UI33 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN11AQ9UI33 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.12□□□□□ -2.07
SCN11AQ9UI33 RNA5SP108-201ENST00000605921 117 ntBASIC2.12□□□□□ -2.07
SCN11AQ9UI33 AC004241.3-201ENST00000611728 517 ntBASIC2.12□□□□□ -2.07
SCN11AQ9UI33 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms