Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 RNA5SP492-201ENST00000411330 114 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AL592310.1-201ENST00000414330 671 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 BX682237.1-201ENST00000415016 335 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC234781.2-201ENST00000426370 994 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AL592447.1-201ENST00000447592 540 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC011825.1-201ENST00000484967 388 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC022483.1-201ENST00000514020 567 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC112198.4-201ENST00000515450 351 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 RNU6-1028P-201ENST00000517164 93 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC090136.1-201ENST00000520009 240 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AP002404.1-201ENST00000532005 451 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC107016.2-201ENST00000547968 190 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AL390838.2-201ENST00000602394 274 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC004853.1-201ENST00000604902 698 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 AC025588.4-201ENST00000615802 908 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 Z99129.2-201ENST00000619967 314 ntBASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.96
KLHL28Q9NXS3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AP005901.5-201ENST00000545779 1796 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 RNU1-140P-201ENST00000365040 165 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 SNORA11.2-201ENST00000408318 127 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 MTATP6P19-201ENST00000413797 659 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 MTATP6P27-201ENST00000416987 621 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 RPL35AP12-201ENST00000425362 338 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC093151.1-201ENST00000427711 313 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 RPL26P6-201ENST00000440913 438 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 HMGN1P5-201ENST00000448591 263 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC234775.1-201ENST00000454247 670 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AL049714.1-201ENST00000466686 347 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC080014.1-201ENST00000496877 1201 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 TMEM251P1-201ENST00000503717 318 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 MTCYBP16-201ENST00000509187 1129 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC009812.2-201ENST00000517657 457 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC087808.1-201ENST00000520501 361 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 MTCO1P47-201ENST00000523889 1271 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC069545.1-201ENST00000605671 358 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AC073348.1-201ENST00000623002 331 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 AP003485.1-201ENST00000625093 753 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 CRYM-AS1-204ENST00000637983 556 ntBASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
KLHL28Q9NXS3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 FRG1BP-201ENST00000278882 761 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 RNU1-109P-201ENST00000383960 147 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 MIR1290-201ENST00000408735 78 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 RNU2-42P-201ENST00000410697 113 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 RPL7P37-201ENST00000425095 738 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 USP9YP22-201ENST00000438971 294 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 COX6CP2-201ENST00000444980 225 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 MTCO3P11-201ENST00000455103 774 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 AP004217.1-201ENST00000480579 346 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 RPL30P5-201ENST00000494923 336 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 AC008885.1-201ENST00000514930 301 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 MIR3912-201ENST00000577566 105 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 AL136363.1-201ENST00000605349 337 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 AC068880.5-201ENST00000624331 290 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 AL137790.1-201ENST00000634283 177 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 LRRC77P-213ENST00000637727 880 ntBASIC2.76□□□□□ -1.97
KLHL28Q9NXS3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms