Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AP001804.3-201ENST00000525146 880 ntBASIC2.21□□□□□ -2.06
CISHQ9NSE2 AP000867.2-201ENST00000532468 320 ntBASIC2.21□□□□□ -2.06
CISHQ9NSE2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 AC012321.1-201ENST00000561622 1588 ntBASIC2.21□□□□□ -2.06
CISHQ9NSE2 MIR4446-201ENST00000578505 67 ntBASIC2.21□□□□□ -2.06
CISHQ9NSE2 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 AC106900.2-201ENST00000604994 317 ntBASIC2.21□□□□□ -2.06
CISHQ9NSE2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.21□□□□□ -2.06
CISHQ9NSE2 MIR219B-201ENST00000637023 88 ntBASIC2.21□□□□□ -2.06
CISHQ9NSE2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CISHQ9NSE2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CISHQ9NSE2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
CISHQ9NSE2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CISHQ9NSE2 RNU6-444P-201ENST00000383988 108 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 SNORA80E-201ENST00000384744 137 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 RNU6-821P-201ENST00000390995 107 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CISHQ9NSE2 ANAPC10P1-201ENST00000395991 556 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 AL356320.2-201ENST00000417263 507 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 RPL7P30-201ENST00000420888 709 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CISHQ9NSE2 MTCO3P30-201ENST00000426425 670 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.2□□□□□ -2.06
CISHQ9NSE2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.2□□□□□ -2.06
CISHQ9NSE2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.2□□□□□ -2.06
CISHQ9NSE2 AL359385.1-201ENST00000456509 365 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 OR9N1P-202ENST00000494289 481 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.2□□□□□ -2.06
CISHQ9NSE2 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.2□□□□□ -2.06
CISHQ9NSE2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.2□□□□□ -2.06
CISHQ9NSE2 AC090616.3-201ENST00000582184 217 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.2□□□□□ -2.06
CISHQ9NSE2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.2□□□□□ -2.06
CISHQ9NSE2 AC245517.5-201ENST00000611529 162 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 AL450472.3-201ENST00000615578 367 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 AL136981.2-201ENST00000617319 734 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 AC135776.4-201ENST00000624300 1904 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CISHQ9NSE2 MTND4P35-201ENST00000604257 1375 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 CKAP2P1-201ENST00000555477 2049 ntBASIC2.2□□□□□ -2.06
CISHQ9NSE2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.2□□□□□ -2.06
CISHQ9NSE2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CISHQ9NSE2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 ENSAP3-201ENST00000312710 333 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CISHQ9NSE2 U8.2-201ENST00000363156 134 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 RNU6-1339P-201ENST00000363574 91 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 SET-203ENST00000372688 801 ntTSL 2 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 RNU6-301P-201ENST00000384277 107 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 TAF9BP2-201ENST00000400856 499 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 UBE2V1P9-201ENST00000414760 368 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AC099677.1-201ENST00000420575 175 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 SNRPGP6-201ENST00000451124 220 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 AC008716.1-201ENST00000511084 513 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 OR4R1P-201ENST00000529879 463 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AC018630.1-201ENST00000541376 925 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 MIR4648-201ENST00000580107 72 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 MIR5194-201ENST00000582634 120 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 DUXAP3-201ENST00000603616 594 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AC068313.1-201ENST00000604028 1008 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AC025588.3-201ENST00000604182 274 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AL121917.1-203ENST00000605534 577 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 AC120053.1-201ENST00000607706 736 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AC090116.1-201ENST00000615679 446 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 AL121594.5-201ENST00000631724 573 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 AL512283.1-201ENST00000606756 1384 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CISHQ9NSE2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CISHQ9NSE2 SEC63P2-201ENST00000503863 1939 ntBASIC2.19□□□□□ -2.06
CISHQ9NSE2 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CISHQ9NSE2 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CISHQ9NSE2 RNU5D-1-201ENST00000363299 116 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CISHQ9NSE2 SNORA70B-201ENST00000384210 135 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms