Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 ERHP1-201ENST00000523006 310 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 IGKV2D-19-201ENST00000523346 262 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AP003181.2-201ENST00000528941 181 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 DEFB108A-201ENST00000530110 222 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 CCNG2P1-201ENST00000549521 1000 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 KC877982.1-201ENST00000602313 470 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC100793.4-201ENST00000613683 429 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AL603758.1-201ENST00000618654 241 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC091953.2-201ENST00000623979 160 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC139792.2-201ENST00000624218 587 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 U6.98-201ENST00000637157 84 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 MIR492-201ENST00000638676 116 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC092326.2-201ENST00000624772 1561 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AL133383.2-201ENST00000622958 2336 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 U1.1-201ENST00000384101 164 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 PTMAP5-201ENST00000393073 333 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AL022722.2-201ENST00000402519 180 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 MTND1P12-201ENST00000455231 147 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 SNRPGP3-201ENST00000469405 227 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 RNA5SP468-201ENST00000516782 93 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 RN7SKP289-201ENST00000517244 295 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 MIR1254-2-201ENST00000579553 63 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 MIR3682-201ENST00000581338 84 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 MIR3118-1-201ENST00000581787 76 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 VN1R85P-201ENST00000601587 426 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AL592436.1-201ENST00000605135 558 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC109347.2-201ENST00000610220 349 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC245517.5-201ENST00000611529 162 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC091304.9-201ENST00000612091 226 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 TUG1_2.1-201ENST00000614234 87 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 AC008121.2-201ENST00000614647 523 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 uc_338.12-201ENST00000616344 181 ntBASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC6A13Q9NSD5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 HSPA8P1-201ENST00000425843 1833 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 GNG5P1-201ENST00000255500 204 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RNU6-50P-201ENST00000362356 103 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 Y_RNA.359-201ENST00000365498 102 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RNU6-1119P-201ENST00000384349 108 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RNU6-348P-201ENST00000384386 107 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RNU6-278P-201ENST00000390945 109 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 MRPL42P2-201ENST00000403169 426 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RNA5SP317-201ENST00000410176 116 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RNA5SP311-201ENST00000411290 116 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 HMGB1P12-201ENST00000438594 598 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AL031667.1-201ENST00000440222 725 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RPS29P31-201ENST00000446147 164 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 ELOCP30-201ENST00000447108 299 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms