Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC093536.2-201ENST00000565257 1406 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 RPS20P2-201ENST00000402520 389 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AL356421.1-201ENST00000403255 413 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 RAB9AP3-201ENST00000412737 573 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 NOTCH2P1-201ENST00000443481 624 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 RAB9AP1-201ENST00000449393 573 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 RPL38P1-201ENST00000460914 211 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC091133.4-201ENST00000511142 308 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 FTH1P9-201ENST00000513251 355 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 RNU6-506P-201ENST00000516553 94 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 RNU6-1073P-201ENST00000517182 106 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 IGKV2-38-201ENST00000517443 247 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 MTCO2P4-201ENST00000517968 247 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 SETP2-201ENST00000553886 926 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 ZNF519P2-201ENST00000557032 169 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC011451.2-201ENST00000604303 598 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC007684.1-201ENST00000609671 477 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AL121772.2-201ENST00000614331 297 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 U4.5-201ENST00000617137 123 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AC015967.1-201ENST00000619893 476 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AL354798.1-201ENST00000622505 329 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.16□□□□□ -1.74
VPS45Q9NRW7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VPS45Q9NRW7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS45Q9NRW7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
VPS45Q9NRW7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
VPS45Q9NRW7 Z82217.1-201ENST00000625157 8149 ntBASIC4.15□□□□□ -1.74
VPS45Q9NRW7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS45Q9NRW7 RNA5SP124-201ENST00000362739 110 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 RNA5SP322-201ENST00000363617 119 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 RN7SKP226-201ENST00000364912 300 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 FCF1P10-201ENST00000407590 479 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AMD1P2-201ENST00000412936 992 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 SPA17P1-201ENST00000416656 452 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 RPL21P66-201ENST00000426566 466 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 VDAC1P3-201ENST00000434069 851 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 MTCYBP45-201ENST00000435243 565 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 CYCSP43-201ENST00000438233 310 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 HMGB1P12-201ENST00000438594 598 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 GAPDHP17-201ENST00000449858 1001 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC021382.1-201ENST00000483523 359 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AL139099.1-201ENST00000497398 403 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC109927.2-201ENST00000506416 303 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC011352.1-201ENST00000512300 793 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 RN7SKP244-201ENST00000516513 307 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 RNU6-430P-201ENST00000517078 107 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 RNU6-201P-201ENST00000517100 61 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 DEFB108A-201ENST00000530110 222 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC006960.3-201ENST00000561845 705 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AL157394.1-201ENST00000562983 1224 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 ZNF192P1-203ENST00000565888 810 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 RPL23AP87-202ENST00000573039 466 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC012417.1-201ENST00000582307 1039 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 MIR5684-201ENST00000585074 65 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms