Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AL732618.1-201ENST00000623251 301 ntBASIC3.48□□□□□ -1.85
HINT3Q9NQE9 AL359740.1-201ENST00000624340 592 ntBASIC3.48□□□□□ -1.85
HINT3Q9NQE9 AC112200.1-201ENST00000625015 234 ntBASIC3.48□□□□□ -1.85
HINT3Q9NQE9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HINT3Q9NQE9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HINT3Q9NQE9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HINT3Q9NQE9 TAB3P1-202ENST00000452645 1634 ntBASIC3.48□□□□□ -1.85
HINT3Q9NQE9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HINT3Q9NQE9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.48□□□□□ -1.85
HINT3Q9NQE9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 MTND5P29-201ENST00000458676 1807 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AC106871.1-201ENST00000568324 3102 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 MIR372-201ENST00000362225 67 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 RNA5SP479-201ENST00000364858 117 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 RNA5SP189-201ENST00000364920 115 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AMD1P2-201ENST00000412936 992 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 RPS15AP12-201ENST00000419498 388 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 USP9YP36-201ENST00000424581 829 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AC119618.1-201ENST00000434191 222 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 ARPC3P1-201ENST00000437218 533 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 MTND1P12-201ENST00000455231 147 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 snoU13.4-201ENST00000458916 104 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 RPL31P13-201ENST00000484151 370 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AL358832.1-201ENST00000497800 389 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AC020593.1-201ENST00000507399 299 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 RN7SKP83-201ENST00000516512 178 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 MTCO2P4-201ENST00000517968 247 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 SUMO2P20-201ENST00000520803 283 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AC005951.1-201ENST00000576706 485 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 VN1R85P-201ENST00000601587 426 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AL020997.2-201ENST00000602607 184 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 uc_338.32-201ENST00000615087 172 ntBASIC3.47□□□□□ -1.85
HINT3Q9NQE9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
HINT3Q9NQE9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.46□□□□□ -1.85
HINT3Q9NQE9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
HINT3Q9NQE9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 AC007685.1-201ENST00000329806 452 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 SNORA31-201ENST00000362607 130 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 Y_RNA.41-201ENST00000362646 102 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 RNU6-223P-201ENST00000362830 107 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 RNA5SP515-201ENST00000364570 118 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 RNY3P13-201ENST00000365542 102 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 RNU6-259P-201ENST00000383999 107 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 RNU5A-6P-201ENST00000384136 116 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 Y_RNA.505-201ENST00000384489 102 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 RNU6-278P-201ENST00000390945 109 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 SNORA57.1-201ENST00000391227 145 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 AL109755.1-201ENST00000401791 649 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 PPIAP31-201ENST00000405422 495 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 RNU4-6P-201ENST00000410804 122 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 PPP1R11P2-201ENST00000423543 382 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 AC104651.1-201ENST00000427559 735 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 AC104850.1-201ENST00000435940 476 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 MTND1P34-201ENST00000438556 671 ntBASIC3.46□□□□□ -1.86
HINT3Q9NQE9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.46□□□□□ -1.86
HINT3Q9NQE9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms