Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 PTMAP2-201ENST00000397627 327 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 MTND1P21-201ENST00000412991 285 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 RABEPKP1-201ENST00000440529 1026 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC010655.1-201ENST00000449336 292 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 RPL9P32-201ENST00000464118 620 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 MTND1P3-201ENST00000484956 952 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 RPL21P129-201ENST00000491732 478 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC093278.1-201ENST00000494700 600 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AP002812.1-201ENST00000495378 474 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 SNORA18.6-201ENST00000516792 115 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AP004371.1-201ENST00000525240 214 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AP003122.4-201ENST00000530980 758 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC018630.1-201ENST00000541376 925 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC123904.2-201ENST00000548059 300 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 SNORD84-203ENST00000584275 78 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 HMGN1P30-201ENST00000589286 268 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 XIAPP1-201ENST00000603162 600 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AL136363.2-201ENST00000604173 851 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AL158211.4-201ENST00000606988 584 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AL355472.4-201ENST00000610233 626 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC013562.2-201ENST00000611632 603 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC012150.2-201ENST00000621300 544 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC009268.2-201ENST00000621925 457 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 CR392039.5-201ENST00000623201 510 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC112204.3-201ENST00000623822 332 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC048347.1-201ENST00000624621 427 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC024560.2-201ENST00000507981 1497 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC092447.7-201ENST00000422212 1621 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 FARSBP1-201ENST00000435808 1778 ntBASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MKKSQ9NPJ1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 RNY4P34-201ENST00000364779 95 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 SNORD3H-201ENST00000384486 214 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 RNU1-89P-201ENST00000384592 164 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 SNORA48.7-201ENST00000391302 135 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 RNU2-8P-201ENST00000410727 190 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 HMGN1P24-201ENST00000412282 298 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 OR1AA1P-201ENST00000419597 916 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AF228730.2-201ENST00000438784 848 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC092473.1-201ENST00000441098 221 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AL121871.1-201ENST00000443413 436 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 RAC1P7-201ENST00000445367 377 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 CEACAMP4-201ENST00000457676 421 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 HMGN1P11-201ENST00000508668 303 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 Y_RNA.672-201ENST00000516289 104 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 DUXAP2-201ENST00000519198 589 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 MTCYBP41-201ENST00000528913 1123 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AP003181.2-201ENST00000528941 181 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC022880.1-201ENST00000534017 973 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC107016.1-201ENST00000550463 337 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AL360157.1-201ENST00000565962 87 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 OR4K8P-201ENST00000578842 1048 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 ZNF415P1-201ENST00000582279 1166 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 MIR3158-1-201ENST00000583596 81 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AL137849.1-201ENST00000604767 169 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 AC103710.3-201ENST00000608157 948 ntBASIC3.57□□□□□ -1.84
MKKSQ9NPJ1 BX664608.1-201ENST00000610519 487 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms