Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AL591719.1-201ENST00000444669 744 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 HMGN2P23-201ENST00000456759 269 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AC104689.1-201ENST00000473356 768 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 RPL37P25-201ENST00000507308 276 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AC007275.1-201ENST00000621243 671 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 MTND4P35-201ENST00000604257 1375 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 SNORA1.3-201ENST00000384676 136 ntBASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 RPL7P52-201ENST00000449200 742 ntBASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AC010285.1-201ENST00000470580 392 ntBASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 IGLV3-17-201ENST00000519099 244 ntBASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 MTCO1P47-201ENST00000523889 1271 ntBASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AC074029.2-201ENST00000551045 634 ntBASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AC091057.2-201ENST00000602594 792 ntBASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AL391597.1-201ENST00000618707 694 ntBASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KIAA1549Q9HCM3 CD24P4-201ENST00000382840 243 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 SNORA51.11-201ENST00000384442 131 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 RABEPKP1-201ENST00000440529 1026 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC109486.1-201ENST00000486833 374 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 HMGB1P22-201ENST00000505315 124 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 SNORA31.8-201ENST00000516327 108 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 SNORA31.20-201ENST00000517111 133 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 MTND2P26-201ENST00000528255 1029 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AL355810.1-201ENST00000614629 552 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 MIR6132-201ENST00000622083 109 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC135776.4-201ENST00000624300 1904 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 MTND5P29-201ENST00000458676 1807 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 RNU6-452P-201ENST00000384406 107 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 USP9YP27-201ENST00000418455 438 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AL445685.2-201ENST00000422551 342 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC092798.1-201ENST00000458542 409 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 snoU13.23-201ENST00000458863 104 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 NCOR1P1-202ENST00000486162 291 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC135721.1-201ENST00000497954 479 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC108210.2-201ENST00000503681 201 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 RNU1-40P-201ENST00000516816 164 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 RNU1-97P-201ENST00000516872 164 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC120053.1-201ENST00000607706 736 ntBASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
KIAA1549Q9HCM3 AC012321.1-201ENST00000561622 1588 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 TAS2R15P-201ENST00000390674 928 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 RNA5SP338-201ENST00000410495 85 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AC008173.1-201ENST00000418901 264 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AL445646.1-201ENST00000431784 216 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 RPL7P29-201ENST00000437151 728 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 LSM1P1-201ENST00000438629 273 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 RNU6-717P-201ENST00000459076 104 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 RNU6-237P-201ENST00000515985 71 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AP001804.3-201ENST00000525146 880 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 MYL12BP1-201ENST00000569826 507 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AL137246.1-201ENST00000607072 977 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 VN1R74P-201ENST00000613259 503 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AC068831.7-201ENST00000616954 363 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 AC090897.3-201ENST00000636973 1157 ntBASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
KIAA1549Q9HCM3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 TMEM167AP1-201ENST00000423409 219 ntBASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.79□□□□□ -2.12
KIAA1549Q9HCM3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms