Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 FAT1P1-201ENST00000406588 507 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 RNA5SP492-201ENST00000411330 114 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC007435.1-201ENST00000421086 415 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 RPL30P14-201ENST00000482744 348 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC010460.2-201ENST00000509054 677 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC104986.1-201ENST00000517978 436 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 EEF1B2P4-201ENST00000551398 348 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 RPL23AP78-201ENST00000599928 470 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC091057.2-201ENST00000602594 792 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AL035411.2-201ENST00000604022 421 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC069431.2-201ENST00000604149 1099 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC107294.1-201ENST00000609524 467 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC009570.1-201ENST00000609599 745 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC005332.6-201ENST00000613178 446 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AL360181.4-201ENST00000621752 134 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC073348.1-201ENST00000623002 331 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 U6.101-201ENST00000637707 76 ntBASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
RPAP3Q9H6T3 AC004944.1-201ENST00000517807 3059 ntBASIC3.28□□□□□ -1.89
RPAP3Q9H6T3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 Y_RNA.25-201ENST00000362528 102 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 RNU5D-1-201ENST00000363299 116 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 U3.6-201ENST00000363622 211 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 MIR506-201ENST00000384998 124 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 MIR620-201ENST00000385232 95 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AL450338.1-201ENST00000407987 512 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC245054.2-201ENST00000415639 319 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC093151.1-201ENST00000427711 313 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 USP9YP22-201ENST00000438971 294 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 RNA5SP310-201ENST00000459084 116 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC009901.1-201ENST00000506703 541 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC006390.1-201ENST00000508068 283 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC125611.1-201ENST00000549563 229 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 RPL23AP92-201ENST00000603609 255 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC069545.1-201ENST00000605671 358 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC009039.2-201ENST00000624524 529 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 AC138915.1-201ENST00000565427 1685 ntBASIC3.27□□□□□ -1.89
RPAP3Q9H6T3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AC099654.7-201ENST00000635788 2127 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AL049780.3-201ENST00000624612 1583 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AC107982.1-201ENST00000507171 1300 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 RNU4-82P-201ENST00000362443 140 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 SNORD56.5-201ENST00000364281 72 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 SNORD116-12-201ENST00000384468 92 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 SNORA46-201ENST00000384762 135 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 MIR196B-201ENST00000384852 84 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 MIR122-201ENST00000385044 85 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 MIR34A-201ENST00000385130 110 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 SNORA40.2-201ENST00000390847 128 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AL138827.1-201ENST00000402666 306 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 RNU2-15P-201ENST00000410692 191 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 Z75741.2-201ENST00000417272 1167 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 PSMA6P3-201ENST00000428242 164 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 FCF1P6-201ENST00000456841 595 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AC126389.1-201ENST00000477436 290 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AC113420.1-201ENST00000507903 571 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 MTCYBP16-201ENST00000509187 1129 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 AP001804.3-201ENST00000525146 880 ntBASIC3.26□□□□□ -1.89
RPAP3Q9H6T3 HSPE1P20-201ENST00000538133 289 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms