Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RPL21P40-201ENST00000428586 483 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AL390023.1-201ENST00000428836 262 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 YME1L1P1-201ENST00000429435 297 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 USP9YP35-201ENST00000435696 412 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC005019.1-201ENST00000436455 431 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 COX7BP2-201ENST00000437976 242 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC016696.1-201ENST00000446949 318 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 EEF1E1P1-201ENST00000446998 430 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC140076.1-201ENST00000449897 361 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 DUXAP8-207ENST00000456786 622 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 USP9YP25-201ENST00000457708 443 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AL049714.1-201ENST00000466686 347 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 MTND1P8-201ENST00000571424 950 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC011260.1-201ENST00000578420 472 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 UBL5P2-201ENST00000583788 219 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 HSPE1P7-201ENST00000604681 321 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AL158211.4-201ENST00000606988 584 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC009974.1-201ENST00000608881 455 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 OR4G3P-201ENST00000633500 913 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 FAM35CP-201ENST00000554755 2470 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX47Q9H0S4 AP000776.1-201ENST00000530032 1663 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 MTCO1P9-201ENST00000505577 1534 ntBASIC3.14□□□□□ -1.91
DDX47Q9H0S4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AL161781.1-201ENST00000354277 403 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 SNORA14A-201ENST00000364773 135 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 RNU6-359P-201ENST00000365466 108 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 SNORD15B-201ENST00000384714 146 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AL451074.5-201ENST00000415894 435 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 OR4K11P-201ENST00000431829 904 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 RPS29P6-201ENST00000438196 145 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 Z75741.1-201ENST00000446793 314 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 CYCSP35-201ENST00000451978 304 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 RPL32P34-201ENST00000486380 400 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 HMGB1P36-201ENST00000487709 576 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC026801.2-201ENST00000515352 425 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 NBEAP1-201ENST00000554452 979 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AL133393.1-201ENST00000603277 287 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC006213.4-201ENST00000616184 634 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC084757.4-201ENST00000616350 526 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC008443.7-201ENST00000622195 246 ntBASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX47Q9H0S4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC013410.2-201ENST00000422627 201 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 PPP1R11P2-201ENST00000423543 382 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 RPL7P46-201ENST00000425129 740 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 USP9YP10-201ENST00000454868 628 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 RN7SL863P-201ENST00000462370 296 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 RPL21P8-201ENST00000465083 535 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC068724.1-201ENST00000487100 792 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 CASP1P1-201ENST00000526345 212 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AP003497.1-201ENST00000528472 562 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC011611.1-201ENST00000552179 197 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms