Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC126182.1-201ENST00000478134 357 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 RPS27P27-201ENST00000498779 255 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AP003122.3-201ENST00000526316 255 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 UBTFL10-201ENST00000528532 562 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC090502.2-201ENST00000549267 280 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AL160237.3-201ENST00000604114 1013 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC008083.4-201ENST00000615076 444 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AP000526.1-201ENST00000603308 1388 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 RNU6-50P-201ENST00000362356 103 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 MIR518C-201ENST00000384822 101 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AP000705.1-201ENST00000454567 350 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 Y_RNA.638-201ENST00000459374 113 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 RNA5SP320-201ENST00000516263 124 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 RNU6-56P-201ENST00000516986 93 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 OR4P1P-201ENST00000530808 1136 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC126177.3-201ENST00000551839 688 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC027176.1-201ENST00000560204 514 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 SNORD53-201ENST00000579969 78 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC008507.2-201ENST00000588402 1176 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 VN1R78P-201ENST00000597393 564 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AC099785.1-201ENST00000605697 437 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 AL583856.2-201ENST00000606298 543 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 BX664608.1-201ENST00000610519 487 ntBASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RPAP1Q9BWH6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 NUP58P1-201ENST00000502546 1738 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 HMGB1P5-201ENST00000255320 642 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 SNORD62.1-201ENST00000362541 86 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RNU6-492P-201ENST00000363035 104 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RNU6-236P-201ENST00000363886 106 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RNA5SP210-201ENST00000391034 120 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RNU1-101P-201ENST00000391171 127 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RPL21P75-201ENST00000396599 483 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RPL21P28-201ENST00000401418 483 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RPL7P27-201ENST00000403775 720 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AL592114.1-201ENST00000403842 483 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AL024474.1-201ENST00000404655 591 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RNU6-712P-201ENST00000410558 100 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RN7SKP192-201ENST00000411291 327 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC092634.6-201ENST00000418558 192 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RAC1P8-201ENST00000427086 527 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AP000949.1-201ENST00000438328 629 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 ARF4P4-201ENST00000439608 520 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RPL23AP20-201ENST00000447965 421 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 MTCO1P48-201ENST00000448024 1096 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RPL21P39-201ENST00000463605 483 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC011979.1-201ENST00000472300 483 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RPL21P93-201ENST00000480465 489 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC233702.1-201ENST00000482905 502 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC087190.1-201ENST00000484462 480 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC093591.1-201ENST00000491435 481 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RPL21P16-201ENST00000495531 483 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 BOLA3P3-201ENST00000505182 232 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC016550.1-201ENST00000505348 785 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RNA5SP468-201ENST00000516782 93 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 RNU6-826P-201ENST00000516827 104 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 SNORA48.10-201ENST00000516965 160 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC104417.1-201ENST00000523974 751 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC090666.1-201ENST00000578241 445 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 MIR4524B-201ENST00000581569 115 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 MIR4769-201ENST00000584126 77 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AP000787.2-201ENST00000604432 568 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC007621.1-201ENST00000604544 437 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC092954.1-201ENST00000609121 445 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC025034.2-201ENST00000623264 286 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC080188.3-201ENST00000624842 748 ntBASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP1Q9BWH6 AC006378.2-201ENST00000623178 2476 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 U3.29-201ENST00000391296 212 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 AC016769.3-201ENST00000396562 315 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms