Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL122001.1-201ENST00000457027 370 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 RPS20P24-201ENST00000457473 361 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 RPL31P50-201ENST00000471002 296 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AC068724.1-201ENST00000487100 792 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 RPL21P13-201ENST00000488305 481 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AC010625.1-201ENST00000511296 403 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 COX6CP8-201ENST00000522620 226 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 MTCYBP41-201ENST00000528913 1123 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 MIR3915-201ENST00000578518 97 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 MIR4443-201ENST00000585052 53 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 U73479.1-201ENST00000618062 168 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AC091931.1-201ENST00000623488 728 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AP003399.1-201ENST00000637534 361 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 AC009093.8-201ENST00000641769 292 ntBASIC3.09□□□□□ -1.91
CCDC28BQ9BUN5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CCDC28BQ9BUN5 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.09□□□□□ -1.92
CCDC28BQ9BUN5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC28BQ9BUN5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CCDC28BQ9BUN5 RNU6-761P-201ENST00000384148 107 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 Y_RNA.560-201ENST00000384689 102 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 RN7SKP266-201ENST00000410232 287 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 RNA5SP56-201ENST00000410277 118 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 MTATP6P27-201ENST00000416987 621 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC006548.1-201ENST00000427470 102 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 PSMA6P3-201ENST00000428242 164 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AL512649.1-201ENST00000428997 581 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC122718.1-201ENST00000439448 744 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC092641.1-201ENST00000440229 772 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 ELOCP23-201ENST00000452014 332 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 OR6C5P-201ENST00000452388 923 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 OR6K1P-201ENST00000456766 971 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 SETP11-201ENST00000473027 690 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC104563.1-201ENST00000476147 376 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 HMGN2P13-201ENST00000476476 274 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC117522.2-201ENST00000510049 657 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC104619.4-201ENST00000510773 249 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC024589.1-201ENST00000512207 263 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC106038.2-201ENST00000520706 568 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 GTF2IP22-201ENST00000554443 182 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AP001004.1-201ENST00000582468 324 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC023043.3-201ENST00000593113 385 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 WISP1-OT1-201ENST00000602893 642 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AL590229.1-201ENST00000603497 542 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 MTCYBP22-201ENST00000603788 447 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC106028.5-201ENST00000610332 395 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC093783.1-201ENST00000612976 329 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC008443.7-201ENST00000622195 246 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AL356596.1-201ENST00000624230 379 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AC007494.3-201ENST00000624660 743 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 CR381572.1-201ENST00000625098 102 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 AL022578.1-201ENST00000439330 1433 ntBASIC3.08□□□□□ -1.92
CCDC28BQ9BUN5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 RNU6-335P-201ENST00000364563 113 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 SNORA56-201ENST00000383966 129 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 SNORD116-1-201ENST00000384335 95 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 U3.29-201ENST00000391296 212 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 MIR1302-8-201ENST00000408342 128 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC104332.2-201ENST00000429959 156 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 MED14P1-201ENST00000430517 648 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms