Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 Y_RNA.279-201ENST00000364763 95 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 Y_RNA.409-201ENST00000383990 98 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 RNU6-432P-201ENST00000384196 109 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 SNORD3H-201ENST00000384486 214 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 Y_RNA.529-201ENST00000384586 119 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 MIR128-1-201ENST00000384921 82 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 RNU6-754P-201ENST00000391166 107 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 FAT1P1-201ENST00000406588 507 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 BX295541.1-201ENST00000417774 250 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 MTND1P18-201ENST00000448191 573 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 BX510359.1-201ENST00000456973 237 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 RNA5SP103-201ENST00000459503 118 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 RPS27AP17-201ENST00000463344 455 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC010587.1-201ENST00000505809 469 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AP000857.1-201ENST00000532151 543 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC126177.3-201ENST00000551839 688 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 FKBP1BP1-201ENST00000553366 325 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AP001836.1-201ENST00000604675 523 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC007363.1-201ENST00000604736 620 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 FAM27D1-201ENST00000612308 341 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 uc_338.12-201ENST00000616344 181 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC019278.1-201ENST00000623516 479 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC091953.2-201ENST00000623979 160 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 NXPH1-205ENST00000602349 1953 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AC004925.1-201ENST00000624256 2706 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC009643.2-201ENST00000603543 1448 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AL450345.1-202ENST00000605741 3881 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 RNU1-14P-201ENST00000362759 152 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 RNU6-483P-201ENST00000384088 108 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 MIR19A-201ENST00000384878 82 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 RNA5SP36-201ENST00000410197 133 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 RN7SKP156-201ENST00000410308 342 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 RPS29P4-201ENST00000414733 161 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AF228730.4-201ENST00000421457 183 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 ATP5HP2-201ENST00000433885 485 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 TIMM9P1-201ENST00000436122 256 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 RPL7AP61-201ENST00000443410 636 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 FABP3P2-201ENST00000453169 399 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 MTCO3P20-201ENST00000454926 688 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 HMGB3P30-201ENST00000457863 606 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC114967.1-201ENST00000504890 259 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 Y_RNA.675-201ENST00000516389 149 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 RNU6-798P-201ENST00000516912 103 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 HMGB1P19-201ENST00000517578 577 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AP004371.1-201ENST00000525240 214 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC011979.2-201ENST00000527568 352 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC125611.2-201ENST00000551907 647 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 CBX3P5-201ENST00000552017 521 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AL442663.2-201ENST00000554385 511 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AL512360.1-201ENST00000555346 234 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC025678.1-201ENST00000567861 338 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 RPS3AP23-202ENST00000574601 686 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC022884.2-201ENST00000578535 580 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 U3.45-201ENST00000607547 219 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC093838.1-201ENST00000613014 469 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 AC055839.1-201ENST00000634467 498 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 MIR3662-201ENST00000637030 95 ntBASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms