Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.9□□□□□ -1.79
MEIS3Q99687 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.9□□□□□ -1.79
MEIS3Q99687 ADI1P3-201ENST00000549509 470 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC124947.2-202ENST00000552735 133 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.9□□□□□ -1.79
MEIS3Q99687 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.9□□□□□ -1.79
MEIS3Q99687 SERPINE4P-201ENST00000554978 281 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 PCMTD1P2-201ENST00000565017 355 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.9□□□□□ -1.79
MEIS3Q99687 AC005771.1-201ENST00000585581 349 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.9□□□□□ -1.79
MEIS3Q99687 AC018816.2-201ENST00000621460 353 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC015726.3-201ENST00000624501 418 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC092079.1-201ENST00000558620 1985 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 AC010329.2-201ENST00000595195 2737 ntBASIC3.9□□□□□ -1.79
MEIS3Q99687 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
MEIS3Q99687 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.89□□□□□ -1.79
MEIS3Q99687 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.89□□□□□ -1.79
MEIS3Q99687 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
MEIS3Q99687 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
MEIS3Q99687 AC107081.3-201ENST00000612715 2034 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.89□□□□□ -1.79
MEIS3Q99687 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MEIS3Q99687 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MEIS3Q99687 RNU6-492P-201ENST00000363035 104 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.89□□□□□ -1.79
MEIS3Q99687 SNORA9-201ENST00000384215 133 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 RPS3AP36-201ENST00000398190 775 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AL450338.1-201ENST00000407987 512 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.89□□□□□ -1.79
MEIS3Q99687 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.89□□□□□ -1.79
MEIS3Q99687 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.89□□□□□ -1.79
MEIS3Q99687 B3GNT2P1-201ENST00000434960 952 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.89□□□□□ -1.79
MEIS3Q99687 NFU1P2-201ENST00000448700 469 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 RPL7P31-201ENST00000450192 724 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 MTCO3P11-201ENST00000455103 774 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.89□□□□□ -1.79
MEIS3Q99687 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.89□□□□□ -1.79
MEIS3Q99687 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MEIS3Q99687 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.89□□□□□ -1.79
MEIS3Q99687 AC008885.1-201ENST00000514930 301 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 RNA5SP217-201ENST00000515959 91 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 SNORA48.10-201ENST00000516965 160 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.89□□□□□ -1.79
MEIS3Q99687 AC087276.1-201ENST00000529659 480 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AL121579.1-201ENST00000555129 305 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.89□□□□□ -1.79
MEIS3Q99687 CENPUP2-201ENST00000555897 1186 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 MIR3200-201ENST00000580767 85 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.89□□□□□ -1.79
MEIS3Q99687 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.89□□□□□ -1.79
MEIS3Q99687 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.89□□□□□ -1.79
MEIS3Q99687 AL356055.1-201ENST00000602528 446 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AC004067.1-201ENST00000608733 700 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AC091834.1-201ENST00000614543 472 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AC092794.2-201ENST00000620933 563 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AC099506.2-201ENST00000623074 221 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.89□□□□□ -1.79
MEIS3Q99687 FAM157B-203ENST00000639350 358 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 AC099654.10-201ENST00000640395 161 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.89□□□□□ -1.79
MEIS3Q99687 GDI2P1-201ENST00000429312 1336 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 MTCO1P14-201ENST00000441695 1559 ntBASIC3.89□□□□□ -1.79
MEIS3Q99687 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
MEIS3Q99687 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MEIS3Q99687 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MEIS3Q99687 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.88□□□□□ -1.79
MEIS3Q99687 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.88□□□□□ -1.79
MEIS3Q99687 RNU6-723P-201ENST00000383973 107 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 SNORA40.3-201ENST00000390964 122 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 RNU6-780P-201ENST00000391030 104 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AC110754.1-201ENST00000399740 601 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AL139098.1-201ENST00000407291 389 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.88□□□□□ -1.79
MEIS3Q99687 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.88□□□□□ -1.79
MEIS3Q99687 FCF1P2-201ENST00000415284 583 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AC245291.1-201ENST00000419501 328 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 USP9YP18-201ENST00000425912 695 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.88□□□□□ -1.79
MEIS3Q99687 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.88□□□□□ -1.79
MEIS3Q99687 AL831737.1-201ENST00000441288 271 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AC092001.1-201ENST00000453012 261 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AL354710.1-201ENST00000453641 246 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AC146507.1-201ENST00000468335 354 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 ST13P14-201ENST00000474095 734 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AC069439.1-201ENST00000494739 167 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 PRDX4P1-201ENST00000507189 574 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.88□□□□□ -1.79
MEIS3Q99687 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.88□□□□□ -1.79
MEIS3Q99687 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.88□□□□□ -1.79
MEIS3Q99687 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.88□□□□□ -1.79
MEIS3Q99687 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MEIS3Q99687 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
MEIS3Q99687 AC092954.2-201ENST00000609103 430 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AL591516.1-201ENST00000611326 274 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AL359535.1-201ENST00000612100 1087 ntBASIC3.88□□□□□ -1.79
MEIS3Q99687 AC018926.3-201ENST00000618841 406 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms