Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNU6-723P-201ENST00000383973 107 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 SNORD51-201ENST00000384320 80 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 AIMP1P1-201ENST00000418670 937 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 SKP1P1-201ENST00000438081 489 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 MUPP-201ENST00000438111 566 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 SNRPEP7-201ENST00000438350 220 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.37□□□□□ -1.87
CDCA3Q99618 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.37□□□□□ -1.87
CDCA3Q99618 RPL7P52-201ENST00000449200 742 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.37□□□□□ -1.87
CDCA3Q99618 HMGB1P15-201ENST00000453854 435 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.37□□□□□ -1.87
CDCA3Q99618 MTCO3P16-201ENST00000454456 754 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 KC877373.1-201ENST00000479066 408 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.37□□□□□ -1.87
CDCA3Q99618 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.37□□□□□ -1.87
CDCA3Q99618 MTND2P38-201ENST00000522536 667 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.37□□□□□ -1.87
CDCA3Q99618 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.37□□□□□ -1.87
CDCA3Q99618 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDCA3Q99618 OR6C7P-201ENST00000547875 934 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.37□□□□□ -1.87
CDCA3Q99618 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.37□□□□□ -1.87
CDCA3Q99618 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.37□□□□□ -1.87
CDCA3Q99618 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.37□□□□□ -1.87
CDCA3Q99618 XIAPP1-201ENST00000603162 600 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 AL357080.1-201ENST00000617394 239 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 AC099506.2-201ENST00000623074 221 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.37□□□□□ -1.87
CDCA3Q99618 SRP72P2-201ENST00000344851 1979 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.37□□□□□ -1.87
CDCA3Q99618 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
CDCA3Q99618 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.37□□□□□ -1.87
CDCA3Q99618 AC091152.2-201ENST00000591628 2569 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.37□□□□□ -1.87
CDCA3Q99618 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.37□□□□□ -1.87
CDCA3Q99618 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.36□□□□□ -1.87
CDCA3Q99618 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CDCA3Q99618 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDCA3Q99618 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDCA3Q99618 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.36□□□□□ -1.87
CDCA3Q99618 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDCA3Q99618 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDCA3Q99618 FTLP6-201ENST00000355274 422 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 RNU6-433P-201ENST00000363216 104 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
CDCA3Q99618 MIR320C1-201ENST00000408566 88 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 RN7SKP220-201ENST00000410611 288 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 RNU2-47P-201ENST00000410649 186 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 RNU4-72P-201ENST00000410754 173 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.36□□□□□ -1.87
CDCA3Q99618 SDCBPP1-201ENST00000440192 890 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.36□□□□□ -1.87
CDCA3Q99618 snoU109.4-201ENST00000458953 143 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 AC072039.1-201ENST00000477611 581 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 RPS3AP50-201ENST00000487064 803 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 AC068724.1-201ENST00000487100 792 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.36□□□□□ -1.87
CDCA3Q99618 VN1R104P-201ENST00000505115 1009 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.36□□□□□ -1.87
CDCA3Q99618 RNU6-678P-201ENST00000516832 109 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 COX6CP8-201ENST00000522620 226 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 AC126177.3-201ENST00000551839 688 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 UBL5P2-201ENST00000583788 219 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 AC012669.1-201ENST00000603209 283 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 AC055876.5-201ENST00000605667 259 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 Z99129.2-201ENST00000619967 314 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 AL445264.1-201ENST00000621719 171 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.36□□□□□ -1.87
CDCA3Q99618 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.36□□□□□ -1.87
CDCA3Q99618 AC138649.5-201ENST00000637456 137 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDCA3Q99618 AC011477.1-204ENST00000623416 1325 ntBASIC3.36□□□□□ -1.87
CDCA3Q99618 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDCA3Q99618 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDCA3Q99618 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.36□□□□□ -1.87
CDCA3Q99618 AC244517.1-201ENST00000606030 2086 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDCA3Q99618 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDCA3Q99618 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.35□□□□□ -1.87
CDCA3Q99618 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.35□□□□□ -1.87
CDCA3Q99618 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CDCA3Q99618 AC092326.2-201ENST00000624772 1561 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDCA3Q99618 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.35□□□□□ -1.87
CDCA3Q99618 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.35□□□□□ -1.87
CDCA3Q99618 AL138880.1-201ENST00000405824 642 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 RNU6-712P-201ENST00000410558 100 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 RPS15AP38-201ENST00000413110 372 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 TOMM22P1-201ENST00000418578 312 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 USP9YP26-201ENST00000421008 661 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.35□□□□□ -1.87
CDCA3Q99618 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.35□□□□□ -1.87
CDCA3Q99618 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.35□□□□□ -1.87
CDCA3Q99618 MTND4LP10-201ENST00000435146 291 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 LSM1P1-201ENST00000438629 273 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 OR6K5P-201ENST00000447050 945 ntBASIC3.35□□□□□ -1.87
CDCA3Q99618 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.35□□□□□ -1.87
CDCA3Q99618 AL353691.1-201ENST00000451332 387 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms