Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 NEK4P1-201ENST00000433383 879 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 XKRYP5-201ENST00000449659 483 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.44□□□□□ -2.18
SPG11Q96JI7 AC090255.1-201ENST00000495779 349 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.44□□□□□ -2.18
SPG11Q96JI7 HPVC1-201ENST00000629899 1198 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SPG11Q96JI7 AL592437.2-201ENST00000421655 2434 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 AC093775.1-201ENST00000624154 1868 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 Y_RNA.60-201ENST00000362831 98 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 RNU6-53P-201ENST00000365367 106 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 AL645568.3-201ENST00000433683 316 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.44□□□□□ -2.18
SPG11Q96JI7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SPG11Q96JI7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
SPG11Q96JI7 AL359273.1-201ENST00000510918 627 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 AC010265.1-201ENST00000513509 211 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 AC104986.1-201ENST00000517978 436 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.44□□□□□ -2.18
SPG11Q96JI7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.44□□□□□ -2.18
SPG11Q96JI7 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SPG11Q96JI7 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.43□□□□□ -2.18
SPG11Q96JI7 AP001148.1-201ENST00000624124 2359 ntBASIC1.43□□□□□ -2.18
SPG11Q96JI7 RNU6-492P-201ENST00000363035 104 ntBASIC1.43□□□□□ -2.18
SPG11Q96JI7 RNU6-174P-201ENST00000410406 106 ntBASIC1.43□□□□□ -2.18
SPG11Q96JI7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.43□□□□□ -2.18
SPG11Q96JI7 SETP8-201ENST00000435341 628 ntBASIC1.43□□□□□ -2.18
SPG11Q96JI7 RPL39P40-201ENST00000445481 146 ntBASIC1.43□□□□□ -2.18
SPG11Q96JI7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.43□□□□□ -2.18
SPG11Q96JI7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.43□□□□□ -2.18
SPG11Q96JI7 SNORA50A-202ENST00000629536 136 ntBASIC1.43□□□□□ -2.18
SPG11Q96JI7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
SPG11Q96JI7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SPG11Q96JI7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
SPG11Q96JI7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
SPG11Q96JI7 RNU1-93P-201ENST00000364704 169 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 RNA5SP138-201ENST00000365098 114 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SPG11Q96JI7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 AL138787.1-202ENST00000437804 898 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.42□□□□□ -2.18
SPG11Q96JI7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.42□□□□□ -2.18
SPG11Q96JI7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.42□□□□□ -2.18
SPG11Q96JI7 MIR3618-201ENST00000580330 88 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 MTND4LP5-201ENST00000605152 292 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 MIR502-201ENST00000606349 86 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SPG11Q96JI7 RNA5SP338-201ENST00000410495 85 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 AF274854.1-201ENST00000413236 615 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.42□□□□□ -2.18
SPG11Q96JI7 CYP3A137P-201ENST00000562436 69 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 MTATP6P3-201ENST00000581686 676 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.42□□□□□ -2.18
SPG11Q96JI7 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.42□□□□□ -2.18
SPG11Q96JI7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.42□□□□□ -2.18
SPG11Q96JI7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.42□□□□□ -2.18
SPG11Q96JI7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SPG11Q96JI7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SPG11Q96JI7 AC010329.2-201ENST00000595195 2737 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SPG11Q96JI7 DYNLT3P1-201ENST00000378574 347 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 USP9YP27-201ENST00000418455 438 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 RPL31P35-201ENST00000431058 377 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 ARPC3P1-201ENST00000437218 533 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 ARL5AP3-201ENST00000439327 386 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 AL162388.1-201ENST00000450912 352 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.41□□□□□ -2.18
SPG11Q96JI7 AC090751.1-201ENST00000566966 267 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 AC092954.1-201ENST00000609121 445 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 FAM35CP-201ENST00000554755 2470 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SPG11Q96JI7 AC010680.1-201ENST00000590024 3590 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 RNA5SP331-201ENST00000364986 107 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 EIF1AXP1-201ENST00000419267 435 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.41□□□□□ -2.18
SPG11Q96JI7 RPS3AP44-201ENST00000425466 790 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 THAP5P1-201ENST00000439089 262 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 AC079203.1-201ENST00000487972 404 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 AIG1P1-201ENST00000503376 148 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.41□□□□□ -2.18
SPG11Q96JI7 HMGN1P28-201ENST00000521340 364 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 SETP7-201ENST00000552169 453 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 AL590095.2-201ENST00000604136 117 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 U73479.1-201ENST00000618062 168 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 U6.98-201ENST00000637157 84 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 AL512283.1-201ENST00000606756 1384 ntBASIC1.41□□□□□ -2.18
SPG11Q96JI7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SPG11Q96JI7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SPG11Q96JI7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.4□□□□□ -2.18
SPG11Q96JI7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
SPG11Q96JI7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.4□□□□□ -2.18
SPG11Q96JI7 RPS23P4-201ENST00000487908 423 ntBASIC1.4□□□□□ -2.18
SPG11Q96JI7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
SPG11Q96JI7 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.4□□□□□ -2.18
SPG11Q96JI7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms