Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRCH3Q96II8 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.21□□□□□ -1.42
LRCH3Q96II8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRCH3Q96II8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRCH3Q96II8 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.21□□□□□ -1.42
LRCH3Q96II8 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRCH3Q96II8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 AC087516.1-201ENST00000561236 2428 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRCH3Q96II8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRCH3Q96II8 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRCH3Q96II8 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRCH3Q96II8 SNORA63.4-201ENST00000362763 126 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 SNORA70.2-201ENST00000364506 135 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 RNU6-818P-201ENST00000364837 108 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 RNU6-1289P-201ENST00000384431 106 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRCH3Q96II8 DUTP5-201ENST00000406790 469 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 U3.36-201ENST00000408418 213 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 TOMM20P4-201ENST00000427861 435 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 HSPD1P21-201ENST00000436541 245 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 SNORD2.1-201ENST00000458762 69 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 RNA5SP116-201ENST00000516132 98 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 RNU6-347P-201ENST00000516658 105 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 AC021678.3-201ENST00000517893 476 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 PARP1P2-201ENST00000556806 195 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 TXNP4-201ENST00000575018 310 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 AC009314.1-201ENST00000603871 304 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 AC000068.2-201ENST00000608816 460 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 PRO1804-201ENST00000623780 2050 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 IQCB2P-201ENST00000401788 1633 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LRCH3Q96II8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRCH3Q96II8 BIN2P1-201ENST00000504996 1530 ntBASIC6.2□□□□□ -1.42
LRCH3Q96II8 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRCH3Q96II8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRCH3Q96II8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRCH3Q96II8 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRCH3Q96II8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRCH3Q96II8 AC233981.2-201ENST00000611524 1614 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 AL159987.1-201ENST00000347911 293 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 UBE2WP1-201ENST00000362030 340 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 Y_RNA.71-201ENST00000362892 104 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 RNA5SP123-201ENST00000363244 119 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 RNA5SP478-201ENST00000364657 115 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 SNORD116-14-201ENST00000383894 92 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 SNORD116-17-201ENST00000383929 92 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 SNORD116-15-201ENST00000384445 92 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 SNORD116-20-201ENST00000384529 92 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 SNORD116-19-201ENST00000384729 92 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 RNU4-30P-201ENST00000410245 143 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 AC079809.1-201ENST00000415468 276 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 AL358453.1-201ENST00000422522 250 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 AC079354.2-201ENST00000453523 154 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 RPL21P6-201ENST00000479171 504 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 AC012123.2-201ENST00000485809 248 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 RNU6-971P-201ENST00000516920 106 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 AC104581.2-201ENST00000572227 430 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 MIR7703-201ENST00000620784 77 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 AL078621.3-201ENST00000623707 2042 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRCH3Q96II8 PWAR1-201ENST00000624188 2414 ntBASIC6.19□□□□□ -1.42
LRCH3Q96II8 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRCH3Q96II8 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
LRCH3Q96II8 AC007529.1-201ENST00000418574 2178 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LRCH3Q96II8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LRCH3Q96II8 RNA5SP335-201ENST00000363817 110 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 RNU6-514P-201ENST00000384208 107 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms