Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 PMCHL1-202ENST00000423102 261 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 COX6B1P7-201ENST00000430845 235 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 PPIAP17-201ENST00000438507 471 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 RPL21P89-201ENST00000444021 467 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 RPL26P28-201ENST00000451325 435 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 RN7SL542P-201ENST00000467147 294 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC023194.1-201ENST00000493084 308 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 RN7SL812P-201ENST00000493791 279 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC104136.1-201ENST00000512969 394 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 RNU6-885P-201ENST00000516607 104 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 SNORA67.7-201ENST00000516664 135 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 PSMA2P1-201ENST00000526365 646 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 FRG2DP-202ENST00000566967 323 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 BCRP9-201ENST00000605312 388 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AL627309.6-201ENST00000606857 840 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 FAM27D1-201ENST00000612308 341 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 AL021997.2-201ENST00000615674 271 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AC140113.4-201ENST00000622087 222 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 AL356585.4-201ENST00000623078 1229 ntBASIC4.42□□□□□ -1.7
CHFRQ96EP1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHFRQ96EP1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.42□□□□□ -1.7
CHFRQ96EP1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHFRQ96EP1 ZNF33CP-201ENST00000432492 2030 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHFRQ96EP1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHFRQ96EP1 OR11H4-201ENST00000315409 1082 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 RNA5SP175-201ENST00000364275 119 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHFRQ96EP1 RNU6-98P-201ENST00000384173 107 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 RNU6-1158P-201ENST00000391167 107 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 RNU6-510P-201ENST00000391239 108 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 MIR1302-3-201ENST00000408128 138 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 VDAC1P9-201ENST00000412766 841 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 MRPL50P2-201ENST00000416821 482 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC009161.1-201ENST00000417306 376 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AL645937.1-202ENST00000421799 937 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 BX248409.1-201ENST00000455497 255 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC099563.1-201ENST00000456086 418 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC005008.1-201ENST00000456151 612 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 MTCO1P42-201ENST00000457379 726 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AL135752.1-201ENST00000479477 471 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 DEFB109F-201ENST00000491870 277 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC112204.1-201ENST00000502591 103 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 KLHL2P1-201ENST00000508691 521 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC114797.1-201ENST00000514003 728 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 RNA5SP216-201ENST00000516111 123 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 RNA5SP135-201ENST00000517019 125 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AP003181.2-201ENST00000528941 181 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC010653.1-201ENST00000571108 881 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC005668.1-201ENST00000571142 476 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AL160290.3-201ENST00000604869 165 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC010201.1-201ENST00000605051 540 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 CTHRC1P1-201ENST00000605383 469 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC080078.3-201ENST00000605407 463 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 AC234782.5-201ENST00000617723 324 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHFRQ96EP1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 MTCO1P12-201ENST00000414273 1543 ntBASIC4.41□□□□□ -1.7
CHFRQ96EP1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHFRQ96EP1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CHFRQ96EP1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CHFRQ96EP1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHFRQ96EP1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.4□□□□□ -1.7
CHFRQ96EP1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.4□□□□□ -1.7
CHFRQ96EP1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CHFRQ96EP1 AL672167.1-203ENST00000641299 2975 ntBASIC4.4□□□□□ -1.7
CHFRQ96EP1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHFRQ96EP1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHFRQ96EP1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms