Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 VN1R79P-201ENST00000593540 513 ntBASIC1.61□□□□□ -2.15
TTC28Q96AY4 AP003499.2-201ENST00000624100 483 ntBASIC1.61□□□□□ -2.15
TTC28Q96AY4 AL592437.2-201ENST00000421655 2434 ntBASIC1.61□□□□□ -2.15
TTC28Q96AY4 ZNF542P-204ENST00000482727 1305 ntBASIC1.61□□□□□ -2.15
TTC28Q96AY4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TTC28Q96AY4 MIR365B-201ENST00000362317 111 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TTC28Q96AY4 RN7SKP101-201ENST00000411376 320 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.6□□□□□ -2.15
TTC28Q96AY4 AC093084.1-201ENST00000424233 687 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 AC244505.4-201ENST00000434905 287 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 SSXP5-201ENST00000443473 287 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 AC098583.1-201ENST00000480875 255 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 GZMAP1-201ENST00000503054 631 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 AC008885.2-201ENST00000509506 930 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 FABP5P6-201ENST00000510588 409 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 AC112191.3-201ENST00000604371 277 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.6□□□□□ -2.15
TTC28Q96AY4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TTC28Q96AY4 METTL21EP-201ENST00000298105 713 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 RPL5P19-201ENST00000404228 893 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.6□□□□□ -2.15
TTC28Q96AY4 AL513185.2-201ENST00000425543 193 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 RWDD4P2-201ENST00000426392 563 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 AL445305.1-201ENST00000432577 575 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 THAP5P1-201ENST00000439089 262 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 COX6CP12-201ENST00000446748 202 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 AC025033.1-201ENST00000463883 194 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 RWDD4P1-201ENST00000488019 565 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 HMGB1P47-201ENST00000511281 589 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.6□□□□□ -2.15
TTC28Q96AY4 AC084364.2-201ENST00000546924 395 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 AC007229.1-201ENST00000590455 412 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 MIR6078-201ENST00000611069 100 ntBASIC1.6□□□□□ -2.15
TTC28Q96AY4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.59□□□□□ -2.15
TTC28Q96AY4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.15
TTC28Q96AY4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.59□□□□□ -2.15
TTC28Q96AY4 RNA5SP160-201ENST00000364866 120 ntBASIC1.59□□□□□ -2.15
TTC28Q96AY4 RNU1-133P-201ENST00000364867 167 ntBASIC1.59□□□□□ -2.15
TTC28Q96AY4 U3.15-201ENST00000365398 212 ntBASIC1.59□□□□□ -2.15
TTC28Q96AY4 BX510359.4-201ENST00000423750 193 ntBASIC1.59□□□□□ -2.15
TTC28Q96AY4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.59□□□□□ -2.15
TTC28Q96AY4 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.59□□□□□ -2.15
TTC28Q96AY4 AL590664.1-201ENST00000448065 339 ntBASIC1.59□□□□□ -2.15
TTC28Q96AY4 RN7SKP5-201ENST00000517045 272 ntBASIC1.59□□□□□ -2.15
TTC28Q96AY4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TTC28Q96AY4 MTCO3P13-201ENST00000577757 781 ntBASIC1.59□□□□□ -2.15
TTC28Q96AY4 SEPT7P9-203ENST00000604116 343 ntBASIC1.59□□□□□ -2.15
TTC28Q96AY4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.59□□□□□ -2.15
TTC28Q96AY4 AC006026.1-201ENST00000444025 1803 ntBASIC1.59□□□□□ -2.16
TTC28Q96AY4 AC240504.1-201ENST00000395709 845 ntBASIC1.59□□□□□ -2.16
TTC28Q96AY4 AL159169.1-201ENST00000421119 127 ntBASIC1.59□□□□□ -2.16
TTC28Q96AY4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.59□□□□□ -2.16
TTC28Q96AY4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.59□□□□□ -2.16
TTC28Q96AY4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.59□□□□□ -2.16
TTC28Q96AY4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.59□□□□□ -2.16
TTC28Q96AY4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.59□□□□□ -2.16
TTC28Q96AY4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.59□□□□□ -2.16
TTC28Q96AY4 AP002967.1-201ENST00000624203 539 ntBASIC1.59□□□□□ -2.16
TTC28Q96AY4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.59□□□□□ -2.16
TTC28Q96AY4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TTC28Q96AY4 CUL4AP1-201ENST00000514750 1863 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 AC110774.1-201ENST00000623567 2018 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 RNA5SP27-201ENST00000363839 119 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 U3.40-201ENST00000408706 208 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.58□□□□□ -2.16
TTC28Q96AY4 HMGB3P10-201ENST00000434734 572 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.58□□□□□ -2.16
TTC28Q96AY4 AL162388.1-201ENST00000450912 352 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.58□□□□□ -2.16
TTC28Q96AY4 EIF2S2P4-201ENST00000461070 984 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 AC079203.1-201ENST00000487972 404 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TTC28Q96AY4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.58□□□□□ -2.16
TTC28Q96AY4 AGGF1P8-201ENST00000562979 1000 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 MIR4644-201ENST00000579929 84 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 AC124283.4-201ENST00000581815 456 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 AL590095.2-201ENST00000604136 117 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 BNIP3P4-201ENST00000604946 565 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TTC28Q96AY4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TTC28Q96AY4 AC019155.1-201ENST00000382242 574 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 RNU6-35P-201ENST00000384530 107 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
TTC28Q96AY4 SAR1AP2-201ENST00000392696 594 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 ZNF734P-201ENST00000419494 1534 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 EZH2P1-201ENST00000431167 291 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 AL157827.1-201ENST00000447622 132 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.58□□□□□ -2.16
TTC28Q96AY4 NPM1P52-201ENST00000518264 846 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 SETP7-201ENST00000552169 453 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TTC28Q96AY4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.58□□□□□ -2.16
TTC28Q96AY4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.58□□□□□ -2.16
TTC28Q96AY4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
TTC28Q96AY4 Z82195.2-201ENST00000612348 18351 ntBASIC1.58□□□□□ -2.16
TTC28Q96AY4 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 USP9YP33-201ENST00000412220 421 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms