Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
USP9XQ93008 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.52□□□□□ -2.17
USP9XQ93008 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.52□□□□□ -2.17
USP9XQ93008 AC092989.1-201ENST00000481235 277 ntBASIC1.52□□□□□ -2.17
USP9XQ93008 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.52□□□□□ -2.17
USP9XQ93008 USP9YP5-201ENST00000511770 630 ntBASIC1.52□□□□□ -2.17
USP9XQ93008 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.52□□□□□ -2.17
USP9XQ93008 AC087241.2-201ENST00000535801 324 ntBASIC1.52□□□□□ -2.17
USP9XQ93008 RPS3AP23-202ENST00000574601 686 ntBASIC1.52□□□□□ -2.17
USP9XQ93008 AC097468.3-201ENST00000607956 456 ntBASIC1.52□□□□□ -2.17
USP9XQ93008 AP000254.1-201ENST00000609934 520 ntBASIC1.52□□□□□ -2.17
USP9XQ93008 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.52□□□□□ -2.17
USP9XQ93008 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
USP9XQ93008 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
USP9XQ93008 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USP9XQ93008 RNU1-22P-201ENST00000363334 158 ntBASIC1.51□□□□□ -2.17
USP9XQ93008 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.51□□□□□ -2.17
USP9XQ93008 TOMM22P1-201ENST00000418578 312 ntBASIC1.51□□□□□ -2.17
USP9XQ93008 HMGB1P26-201ENST00000452520 628 ntBASIC1.51□□□□□ -2.17
USP9XQ93008 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.51□□□□□ -2.17
USP9XQ93008 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.51□□□□□ -2.17
USP9XQ93008 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USP9XQ93008 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.51□□□□□ -2.17
USP9XQ93008 ZNF876P-202ENST00000398732 1485 ntBASIC1.51□□□□□ -2.17
USP9XQ93008 MTCO1P48-201ENST00000448024 1096 ntBASIC1.51□□□□□ -2.17
USP9XQ93008 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.51□□□□□ -2.17
USP9XQ93008 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.51□□□□□ -2.17
USP9XQ93008 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.51□□□□□ -2.17
USP9XQ93008 AC013444.2-201ENST00000603317 787 ntBASIC1.51□□□□□ -2.17
USP9XQ93008 AC009314.1-201ENST00000603871 304 ntBASIC1.51□□□□□ -2.17
USP9XQ93008 AC010297.1-201ENST00000623948 149 ntBASIC1.51□□□□□ -2.17
USP9XQ93008 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.51□□□□□ -2.17
USP9XQ93008 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
USP9XQ93008 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
USP9XQ93008 RNU6-174P-201ENST00000410406 106 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.5□□□□□ -2.17
USP9XQ93008 SNRPFP3-201ENST00000457792 225 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 SUMO2P6-201ENST00000505273 288 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 SNX5P1-201ENST00000505757 1041 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 AC105313.1-201ENST00000509121 353 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.5□□□□□ -2.17
USP9XQ93008 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 RNA5SP385-201ENST00000515947 110 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
USP9XQ93008 AL389895.1-201ENST00000554127 252 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 MIR3670-2-201ENST00000582974 65 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 MIR3670-1-201ENST00000584160 65 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 MIR3670-3-201ENST00000584855 65 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.5□□□□□ -2.17
USP9XQ93008 MIR3670-4-201ENST00000612260 65 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
USP9XQ93008 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USP9XQ93008 AC095050.2-201ENST00000510748 1458 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USP9XQ93008 AC005336.3-201ENST00000623833 2679 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 Y_RNA.258-201ENST00000364613 105 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.5□□□□□ -2.17
USP9XQ93008 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.5□□□□□ -2.17
USP9XQ93008 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.5□□□□□ -2.17
USP9XQ93008 AC079804.2-201ENST00000490376 200 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.5□□□□□ -2.17
USP9XQ93008 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
USP9XQ93008 AC105245.1-201ENST00000581934 244 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 AC060766.3-201ENST00000591442 263 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 AC112191.3-201ENST00000604371 277 ntBASIC1.5□□□□□ -2.17
USP9XQ93008 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
USP9XQ93008 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.5□□□□□ -2.17
USP9XQ93008 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.49□□□□□ -2.17
USP9XQ93008 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
USP9XQ93008 AC116158.1-201ENST00000560231 2129 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 RNU6-249P-201ENST00000363016 102 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 MTND2P9-201ENST00000422293 931 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.49□□□□□ -2.17
USP9XQ93008 AL445687.1-201ENST00000439946 251 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 BOLA3P3-201ENST00000505182 232 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 RNA5SP436-201ENST00000516020 115 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.49□□□□□ -2.17
USP9XQ93008 MTCO1P7-201ENST00000419523 1542 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.49□□□□□ -2.17
USP9XQ93008 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
USP9XQ93008 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.49□□□□□ -2.17
USP9XQ93008 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USP9XQ93008 CALM1P1-201ENST00000442082 433 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.49□□□□□ -2.17
USP9XQ93008 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.49□□□□□ -2.17
USP9XQ93008 AC107294.3-201ENST00000609211 526 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 VN1R74P-201ENST00000613259 503 ntBASIC1.49□□□□□ -2.17
USP9XQ93008 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.48□□□□□ -2.17
USP9XQ93008 SNORD6-201ENST00000365444 73 ntBASIC1.48□□□□□ -2.17
USP9XQ93008 RPL9P9-202ENST00000466501 579 ntBASIC1.48□□□□□ -2.17
USP9XQ93008 AC109486.1-201ENST00000486833 374 ntBASIC1.48□□□□□ -2.17
USP9XQ93008 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.48□□□□□ -2.17
USP9XQ93008 AC022447.3-201ENST00000506865 495 ntBASIC1.48□□□□□ -2.17
USP9XQ93008 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.48□□□□□ -2.17
USP9XQ93008 AC022790.1-201ENST00000522872 204 ntBASIC1.48□□□□□ -2.17
USP9XQ93008 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.48□□□□□ -2.17
USP9XQ93008 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
USP9XQ93008 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.48□□□□□ -2.17
USP9XQ93008 AC007229.1-201ENST00000590455 412 ntBASIC1.48□□□□□ -2.17
USP9XQ93008 AC024560.3-201ENST00000608482 349 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms