Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU6-989P-201ENST00000362756 107 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RNU6-1249P-201ENST00000363237 111 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 SNORD65C-201ENST00000390962 71 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RNU6-821P-201ENST00000390995 107 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RPL21P75-201ENST00000396599 483 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RPL21P28-201ENST00000401418 483 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 MTND4P13-201ENST00000402078 1023 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AL592114.1-201ENST00000403842 483 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AL024474.1-201ENST00000404655 591 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RNA5SP38-201ENST00000410750 119 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC008173.1-201ENST00000418901 264 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RPP40P1-201ENST00000426762 456 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RPS12P2-201ENST00000439728 269 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 Z96811.1-201ENST00000445880 108 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 HMGN3P1-201ENST00000453847 193 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AP000705.1-201ENST00000454567 350 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RPS29P12-201ENST00000460178 152 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RPL21P39-201ENST00000463605 483 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC133134.1-201ENST00000466800 359 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC011979.1-201ENST00000472300 483 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RPL21P93-201ENST00000480465 489 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC233702.1-201ENST00000482905 502 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC087190.1-201ENST00000484462 480 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC093591.1-201ENST00000491435 481 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RPL9P6-201ENST00000492764 598 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RPL21P16-201ENST00000495531 483 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC096751.1-202ENST00000502691 1067 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC008837.1-201ENST00000511513 412 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 PRELID3BP4-201ENST00000515476 571 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 SNORA31.8-201ENST00000516327 108 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 HSPE1P20-201ENST00000538133 289 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC026464.5-201ENST00000562497 722 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 MIR5007-201ENST00000583098 95 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC245036.5-201ENST00000596330 847 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC098826.3-201ENST00000603823 466 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AP000787.2-201ENST00000604432 568 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC009570.1-201ENST00000609599 745 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AL118556.2-201ENST00000614375 824 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC007275.1-201ENST00000621243 671 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC103798.2-201ENST00000624292 632 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 Z99496.1-201ENST00000469424 1477 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 OR56A5-201ENST00000340110 738 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 RNU6-730P-201ENST00000383954 104 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 FAT1P1-201ENST00000406588 507 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 RNU4-26P-201ENST00000410270 107 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 RNA5SP492-201ENST00000411330 114 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 UBE2V1P9-201ENST00000414760 368 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 FNDC3CP-201ENST00000420795 1155 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 ZYG11AP1-201ENST00000430329 837 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 RPL23AP20-201ENST00000447965 421 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 CDC42P1-201ENST00000456658 548 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 OR4G11P-201ENST00000492842 939 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 RPL21P131-201ENST00000497298 483 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 HMGB1P41-201ENST00000520234 440 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AP000790.1-201ENST00000528891 737 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 RANP3-201ENST00000530970 276 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC018630.1-201ENST00000541376 925 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC124283.4-201ENST00000581815 456 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 MIR3670-2-201ENST00000582974 65 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 MIR3670-1-201ENST00000584160 65 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 MIR3670-3-201ENST00000584855 65 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC091057.2-201ENST00000602594 792 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 RPL23AP88-201ENST00000605759 454 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 MIR3670-4-201ENST00000612260 65 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC008083.4-201ENST00000615076 444 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 MIR6076-201ENST00000617521 113 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC095031.1-201ENST00000623685 672 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 HPVC1-201ENST00000629899 1198 ntBASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms