Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AP002907.1-201ENST00000606361 1430 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 POLHP1-201ENST00000411806 470 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC013404.1-201ENST00000413068 249 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 RPS7P2-201ENST00000435134 607 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 CBWD4P-201ENST00000445695 655 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 RNU1-104P-201ENST00000517280 175 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC007115.1-201ENST00000546853 234 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AL161670.1-201ENST00000554348 137 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 RPAP2P1-201ENST00000603626 1168 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 RPL23AP61-201ENST00000623642 466 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 CKAP2P1-201ENST00000555477 2049 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AL139109.1-201ENST00000455491 297 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC008015.1-201ENST00000555505 465 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 VN1R84P-201ENST00000593697 235 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC009314.1-201ENST00000603871 304 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 MIR6895-201ENST00000613497 78 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 AC080100.1-201ENST00000624239 5356 ntBASIC1.27□□□□□ -2.21
ALMS1Q8TCU4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 RNU2-20P-201ENST00000410425 191 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AL513331.1-201ENST00000411908 397 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AC027124.2-201ENST00000428249 105 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 FO393414.1-201ENST00000428697 1184 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AL353748.2-201ENST00000622148 471 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AF274854.1-201ENST00000413236 615 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 RPL37P25-201ENST00000507308 276 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AC140725.3-201ENST00000616193 880 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 VN1R7P-201ENST00000619242 903 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AL391987.6-201ENST00000305671 199 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 POLR2J4-204ENST00000418424 324 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 RN7SKP40-201ENST00000517211 242 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 DUXAP3-201ENST00000603616 594 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 MIR1294-201ENST00000408503 142 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 VN1R31P-201ENST00000417498 730 ntBASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.26□□□□□ -2.21
ALMS1Q8TCU4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 RNU4-74P-201ENST00000411280 161 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AC108734.3-201ENST00000481241 1165 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AC104435.1-201ENST00000483483 166 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 MRPL42P6-201ENST00000486397 371 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 RNA5SP490-201ENST00000517141 136 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AC067805.1-201ENST00000559344 470 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 SNORA4-201ENST00000584302 138 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 HMGN2P28-201ENST00000606102 262 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 HPVC1-201ENST00000629899 1198 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 RPPH1-2P-201ENST00000516688 293 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AC234775.3-201ENST00000564612 656 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AC135776.4-201ENST00000624300 1904 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 SNORA51.2-201ENST00000364595 132 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AL137159.1-201ENST00000452808 512 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 RPL5P13-201ENST00000462840 709 ntBASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.25□□□□□ -2.21
ALMS1Q8TCU4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.24□□□□□ -2.21
ALMS1Q8TCU4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ALMS1Q8TCU4 TRGV6-201ENST00000417928 299 ntBASIC1.24□□□□□ -2.21
ALMS1Q8TCU4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.24□□□□□ -2.21
ALMS1Q8TCU4 HMGN2P19-201ENST00000425149 265 ntBASIC1.24□□□□□ -2.21
ALMS1Q8TCU4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms