Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 MTCO1P24-201ENST00000515438 1558 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.291-201ENST00000364886 113 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.376-201ENST00000365638 108 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 RNU4-46P-201ENST00000410818 138 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 MRPS18CP6-201ENST00000423587 223 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AL590632.1-201ENST00000424289 371 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 UBE2V1P13-201ENST00000436983 439 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC104332.1-201ENST00000440471 797 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AL450023.3-201ENST00000440592 271 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 TRBV26-201ENST00000456572 344 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 snoU13.8-201ENST00000458890 104 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 MED28P2-201ENST00000475771 317 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-513P-201ENST00000516104 104 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.673-201ENST00000516306 88 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.715-201ENST00000517082 110 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 HSBP1P1-201ENST00000555205 166 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC093591.2-201ENST00000565254 3843 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 MIR4472-2-201ENST00000582069 67 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC115085.1-201ENST00000588924 229 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC006254.3-201ENST00000603353 884 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 AL138713.1-201ENST00000624026 2130 ntBASIC5.14□□□□□ -1.59
SHKBP1Q8TBC3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AC107081.3-201ENST00000612715 2034 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AC126755.2-208ENST00000327792 462 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AC138969.1-213ENST00000331436 462 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 RNA5SP258-201ENST00000362750 119 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-1287P-201ENST00000362914 107 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.276-201ENST00000364732 109 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-61P-201ENST00000365528 109 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-1060P-201ENST00000384664 107 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.576-201ENST00000384781 102 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 RNA5SP332-201ENST00000391063 115 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-1093P-201ENST00000391194 107 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AL024474.1-201ENST00000404655 591 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 DNAJC19P7-201ENST00000428811 344 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 RPL37P1-201ENST00000432310 284 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AC005154.2-201ENST00000438110 379 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AC105402.2-201ENST00000438503 358 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 PRELID3BP1-201ENST00000457142 540 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 SCARNA18-201ENST00000459004 134 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.700-201ENST00000516806 100 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-111P-201ENST00000517179 105 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 FTH1P11-201ENST00000517577 551 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AC104687.2-201ENST00000604442 342 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 HMGB1P50-201ENST00000605814 607 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AC019206.1-201ENST00000621938 425 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 AL445363.3-201ENST00000623080 671 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 CYP3A51P-201ENST00000633513 256 ntBASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SHKBP1Q8TBC3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 TPTE2P4-201ENST00000258589 1605 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms