Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC073465.2-201ENST00000440938 498 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC018437.1-201ENST00000492214 406 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC010186.2-204ENST00000537668 439 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AL161616.1-201ENST00000611867 286 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 MTND1P7-201ENST00000632801 297 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 Z95114.1-201ENST00000624264 14574 ntBASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
NKX2-3Q8TAU0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC083837.1-201ENST00000565297 2994 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 MSL3P1-202ENST00000440028 1468 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RNU1-146P-201ENST00000364015 165 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RNU6-708P-201ENST00000384217 107 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AL133482.1-201ENST00000415988 498 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 PPIAP13-201ENST00000434706 478 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 REG1CP-206ENST00000447469 496 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RPL23AP81-201ENST00000455252 467 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RPS27AP1-201ENST00000475545 471 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RPL21P103-201ENST00000479921 488 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC005912.1-201ENST00000495392 255 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 ACA59.1-201ENST00000515966 143 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC027288.2-201ENST00000553028 243 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RN7SL52P-201ENST00000584271 284 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 MIR6133-201ENST00000617057 108 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RN7SL722P-201ENST00000617780 284 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 RN7SL565P-201ENST00000618246 284 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 CYP4F35P-202ENST00000636121 390 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC074101.1-201ENST00000637861 241 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AL078621.3-201ENST00000623707 2042 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC092079.1-201ENST00000558620 1985 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AL137003.2-201ENST00000606924 2538 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 AC090740.1-201ENST00000623193 2262 ntBASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
NKX2-3Q8TAU0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 EOGT-210ENST00000615922 1931 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 RNU6-1298P-201ENST00000362456 101 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 RNU6-1303P-201ENST00000364841 107 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 Y_RNA.441-201ENST00000384123 112 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 Y_RNA.597-201ENST00000410463 100 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 MTND3P9-201ENST00000429526 346 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 AC091179.1-201ENST00000461606 579 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 RPL9P9-202ENST00000466501 579 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 RPL31P60-201ENST00000478450 367 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 RPS4XP20-201ENST00000505751 772 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 AC109479.2-201ENST00000517842 174 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 AC093023.1-201ENST00000547375 507 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 RPL23AP84-201ENST00000571193 464 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 MIR5701-3-201ENST00000578890 82 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 MIR5701-1-201ENST00000585138 82 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 MIR5701-2-201ENST00000615634 82 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 MIR7641-1-201ENST00000627518 61 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 AC243829.7-201ENST00000633081 225 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 AC008725.1-201ENST00000605123 2263 ntBASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms