Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 Z82190.1-201ENST00000454534 490 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 RNU7-23P-201ENST00000459465 62 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC073901.1-201ENST00000462471 408 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 S100A11P2-201ENST00000467589 312 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC147055.4-201ENST00000504399 745 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC114322.1-201ENST00000506771 926 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC123904.3-201ENST00000547218 814 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 LINC00557-201ENST00000563184 1279 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC012467.1-201ENST00000607740 256 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC003001.2-201ENST00000616294 831 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AC106730.3-201ENST00000624568 641 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 AL137790.1-201ENST00000634283 177 ntBASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLHC1Q8NHS4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AC009812.4-201ENST00000569134 1805 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 SNORA25.6-201ENST00000364121 118 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 SNORA68.1-201ENST00000364537 132 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AL139098.1-201ENST00000407291 389 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 RPS20P25-201ENST00000412447 352 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 RPL7P44-201ENST00000424827 742 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 RPS24P13-201ENST00000442520 397 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AC104389.3-201ENST00000445629 235 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 NDUFA5P7-201ENST00000452914 242 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AC133134.1-201ENST00000466800 359 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 RNU6-928P-201ENST00000516876 104 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 NIFKP8-201ENST00000560500 874 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AL451007.1-201ENST00000595491 289 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 AC093732.2-201ENST00000607950 274 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.5□□□□□ -2.01
CLHC1Q8NHS4 ZNF849P-201ENST00000594711 1566 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 SNORA51.6-201ENST00000384151 125 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 SNORD116-23-201ENST00000384645 92 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 U3.20-201ENST00000390909 217 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 MTCO2P31-201ENST00000402702 684 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 RNU2-15P-201ENST00000410692 191 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 USP9YP20-201ENST00000419224 558 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC005345.1-201ENST00000431868 217 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC024082.2-201ENST00000434771 238 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AL714022.1-201ENST00000439897 151 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 MTCYBP3-201ENST00000445588 1137 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AL050341.1-201ENST00000447743 313 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC116337.2-201ENST00000477662 156 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 KC877373.1-201ENST00000479066 408 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AL135752.1-201ENST00000479477 471 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 FAM172BP-201ENST00000487497 1089 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC090096.1-201ENST00000489168 390 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 EIF4EP3-201ENST00000498782 656 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC048346.1-201ENST00000510247 144 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 HMGB3P3-201ENST00000510526 400 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 MRPS36P2-201ENST00000512569 299 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 RNA5SP135-201ENST00000517019 125 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC109329.2-201ENST00000519658 482 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 HMGB1P41-201ENST00000520234 440 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC113192.3-201ENST00000529152 742 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 SULT1C2P1-202ENST00000562418 459 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 MTCO1P40-201ENST00000574371 625 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC015688.2-201ENST00000584523 262 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 RN7SL622P-201ENST00000585292 275 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 VN1R92P-201ENST00000598511 928 ntBASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.49□□□□□ -2.01
CLHC1Q8NHS4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms