Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PNLDC1Q8NA58 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PNLDC1Q8NA58 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PNLDC1Q8NA58 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PNLDC1Q8NA58 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.82□□□□□ -1.8
PNLDC1Q8NA58 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PNLDC1Q8NA58 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 FRG1CP-201ENST00000358464 769 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 RNU4-79P-201ENST00000362764 141 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 U3.11-201ENST00000364476 212 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 RNU4-48P-201ENST00000365559 182 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 RNU6-116P-201ENST00000384042 109 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 MIR558-201ENST00000384920 94 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 RNU6-332P-201ENST00000391193 108 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AL162578.1-201ENST00000406202 378 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 OR4K11P-201ENST00000431829 904 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 MTATP6P16-201ENST00000434543 526 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 H2AFZP6-201ENST00000444403 394 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 EIF4A1P11-201ENST00000451239 222 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 CEACAMP6-201ENST00000452007 574 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 snoU13.1-201ENST00000459157 104 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AL049714.1-201ENST00000466686 347 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 GMFBP1-201ENST00000467831 427 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC078785.3-201ENST00000476607 425 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 NIPA2P2-201ENST00000496376 1083 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 PARP4P3-201ENST00000510265 317 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 HIGD1AP3-201ENST00000515857 278 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 RAB9BP1-201ENST00000519581 626 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC103843.2-201ENST00000530523 682 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 SETP7-201ENST00000552169 453 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 OR4K8P-201ENST00000578842 1048 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 MIR4512-201ENST00000583257 77 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AL451044.1-201ENST00000604867 238 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AL442067.2-201ENST00000614033 363 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 AC040168.1-201ENST00000623594 991 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 MIR6715B-201ENST00000637172 77 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 OR4G1P-203ENST00000641984 1631 ntBASIC3.81□□□□□ -1.8
PNLDC1Q8NA58 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 OR56B2P-202ENST00000641377 2453 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC021146.4-201ENST00000309229 279 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC011155.1-201ENST00000316512 456 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 RNU6-989P-201ENST00000362756 107 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 RNVU1-3-201ENST00000364313 161 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 RNA5SP332-201ENST00000391063 115 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 GLULP6-201ENST00000399502 913 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AL353678.1-201ENST00000422735 741 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 MTCYBP8-201ENST00000422855 651 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 CHIAP3-201ENST00000423668 1133 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC007677.1-201ENST00000445757 515 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC006480.1-201ENST00000449887 378 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 HMGN2P26-201ENST00000463169 339 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 AC053481.1-201ENST00000467217 306 ntBASIC3.8□□□□□ -1.8
PNLDC1Q8NA58 HMGB1P25-201ENST00000468402 607 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms