Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC130365.2-201ENST00000525882 1201 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 ATP5F1P5-201ENST00000526403 760 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 MRPS21P8-201ENST00000569196 235 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AL138895.2-201ENST00000603019 178 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AL390123.1-201ENST00000603216 237 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 uc_338.26-201ENST00000612659 160 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AL159153.1-201ENST00000619688 317 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AL034549.2-201ENST00000618285 3373 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RPL9P7-201ENST00000330965 580 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 Y_RNA.14-201ENST00000362415 103 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RNA5SP346-201ENST00000363541 121 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RNU6-770P-201ENST00000363929 105 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RN7SKP275-201ENST00000364626 301 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RNA5SP211-201ENST00000365516 117 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 Y_RNA.376-201ENST00000365638 108 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 PPIAP9-201ENST00000403866 498 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AL513043.1-201ENST00000439124 535 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RPL9P9-202ENST00000466501 579 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 HMGN2P13-201ENST00000476476 274 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 FO393415.2-201ENST00000480085 343 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RPL7P51-201ENST00000490532 749 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 FTH1P11-201ENST00000517577 551 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AL158827.2-201ENST00000602494 330 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AC138627.2-201ENST00000624202 601 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AL691447.3-201ENST00000635020 330 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 AC099654.2-201ENST00000433031 1980 ntBASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.42□□□□□ -1.54
DEPDC4Q8N2C3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC004925.1-201ENST00000624256 2706 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 ZNF72P-201ENST00000425869 1908 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 RNU6-595P-201ENST00000363944 107 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 RN7SKP69-201ENST00000365390 305 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 RNU6-398P-201ENST00000384143 109 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 Y_RNA.478-201ENST00000384358 107 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 RNA5SP187-201ENST00000384400 119 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 SNORA51.11-201ENST00000384442 131 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 RNU6-1025P-201ENST00000410629 104 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 MYL8P-204ENST00000431574 518 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC092573.2-201ENST00000434546 243 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 RPL21P13-201ENST00000488305 481 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC083795.1-201ENST00000491760 320 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 SCARNA15.2-201ENST00000516409 127 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 Y_RNA.680-201ENST00000516441 93 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC109329.1-201ENST00000518744 317 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 HSPE1P20-201ENST00000538133 289 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 MIR3921-201ENST00000577308 85 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 FAM60BP-201ENST00000578364 658 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 RPS29P30-201ENST00000600975 111 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 AC004852.3-201ENST00000614131 326 ntBASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.41□□□□□ -1.54
DEPDC4Q8N2C3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms