Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 RNU1-18P-201ENST00000363062 164 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 RNU6-348P-201ENST00000384386 107 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 RNU6-809P-201ENST00000384461 107 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 RNVU1-14-201ENST00000384770 164 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 MRPS18BP2-201ENST00000434310 759 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 ATP5C1P1-201ENST00000441945 895 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 FAM103A2P-201ENST00000444122 354 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 RPS17P13-201ENST00000448974 407 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 USP9YP12-201ENST00000450481 570 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 MTCO3P20-201ENST00000454926 688 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 MTCO1P42-201ENST00000457379 726 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 snoU13.8-201ENST00000458890 104 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 SNORA74D-201ENST00000516404 141 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 MTND4LP18-201ENST00000526864 291 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC107954.1-201ENST00000565906 727 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 TPMTP1-201ENST00000592307 737 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC112191.3-201ENST00000604371 277 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC004853.1-201ENST00000604902 698 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AC040168.1-201ENST00000623594 991 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 AL392088.2-201ENST00000637607 285 ntBASIC4.01□□□□□ -1.77
VPS52Q8N1B4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
VPS52Q8N1B4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS52Q8N1B4 RPS4XP5-202ENST00000449995 1334 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VPS52Q8N1B4 MFSD8-236ENST00000641509 4050 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4□□□□□ -1.77
VPS52Q8N1B4 RNU6-533P-201ENST00000384144 107 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 AL356421.1-201ENST00000403255 413 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 Y_RNA.598-201ENST00000410480 95 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 Y_RNA.608-201ENST00000410647 95 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 RNU6-248P-201ENST00000410720 107 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 BX890604.2-201ENST00000427883 474 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4□□□□□ -1.77
VPS52Q8N1B4 SETP5-201ENST00000437270 562 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4□□□□□ -1.77
VPS52Q8N1B4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4□□□□□ -1.77
VPS52Q8N1B4 AL590365.1-201ENST00000450788 243 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 RPS20P32-201ENST00000456044 356 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4□□□□□ -1.77
VPS52Q8N1B4 TPT1P7-201ENST00000458300 517 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 RPS4XP10-201ENST00000465034 731 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS52Q8N1B4 AC112204.1-201ENST00000502591 103 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 AC026427.2-201ENST00000506228 536 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 AF131216.2-201ENST00000512316 564 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4□□□□□ -1.77
VPS52Q8N1B4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4□□□□□ -1.77
VPS52Q8N1B4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4□□□□□ -1.77
VPS52Q8N1B4 SETP7-201ENST00000552169 453 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4□□□□□ -1.77
VPS52Q8N1B4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4□□□□□ -1.77
VPS52Q8N1B4 SNORA62.6-201ENST00000606322 83 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4□□□□□ -1.77
VPS52Q8N1B4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4□□□□□ -1.77
VPS52Q8N1B4 AC243312.2-201ENST00000623340 601 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
VPS52Q8N1B4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS52Q8N1B4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS52Q8N1B4 AC091152.2-201ENST00000591628 2569 ntBASIC4□□□□□ -1.77
VPS52Q8N1B4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 PRO1804-201ENST00000623780 2050 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 RNU6-853P-201ENST00000364306 107 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 RNU6-297P-201ENST00000384636 107 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 SOD2P1-201ENST00000396543 562 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 HLFP1-201ENST00000402375 499 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 USP9YP14-201ENST00000430663 563 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 SKP1P1-201ENST00000438081 489 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 PGBD4P3-201ENST00000440731 581 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AL022238.1-201ENST00000442557 355 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 RPL21P23-201ENST00000446654 460 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 Z82190.1-201ENST00000454534 490 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms