Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC087894.1-201ENST00000538359 518 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 VN1R87P-201ENST00000596706 487 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 GAS5-AS1-201ENST00000602767 694 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AC007619.2-201ENST00000605743 379 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 AP000238.1-201ENST00000608759 426 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 DBF4P1-201ENST00000412976 1892 ntBASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.66□□□□□ -1.98
CDKL3Q8IVW4 RNU6-859P-201ENST00000362728 107 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 RNU5D-1-201ENST00000363299 116 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 RNU6-839P-201ENST00000363347 108 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AL603865.2-201ENST00000401679 213 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC096533.1-201ENST00000411645 353 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 RPS15AP38-201ENST00000413110 372 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC027644.1-201ENST00000419595 298 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 COTL1P1-201ENST00000422309 375 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 MTCYBP32-201ENST00000427945 1084 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AP000852.1-201ENST00000472460 573 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC026414.1-201ENST00000504046 698 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 snoZ278.1-201ENST00000517059 112 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC090136.1-201ENST00000520009 240 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 FAM60BP-201ENST00000578364 658 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 MIR4666A-201ENST00000580160 79 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 MIR3670-2-201ENST00000582974 65 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 MIR3670-1-201ENST00000584160 65 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 MIR3670-3-201ENST00000584855 65 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 ELOCP29-201ENST00000588193 334 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC099785.1-201ENST00000605697 437 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AP005137.2-201ENST00000609238 400 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC106028.5-201ENST00000610332 395 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 MIR3670-4-201ENST00000612260 65 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AL353748.2-201ENST00000622148 471 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 AC110079.1-202ENST00000635213 138 ntBASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.99
CDKL3Q8IVW4 FAM35BP-202ENST00000497389 3337 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 SNORD62.1-201ENST00000362541 86 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 RNA5SP393-201ENST00000363423 117 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 DEFA7P-201ENST00000382676 285 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC069282.1-201ENST00000411911 526 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC080125.1-201ENST00000414888 684 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 BOLA3P4-201ENST00000418151 400 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 RPL7P30-201ENST00000420888 709 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 RPL7P37-201ENST00000425095 738 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 RPL31P54-201ENST00000429803 370 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC092427.1-202ENST00000430569 476 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC005345.1-201ENST00000431868 217 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AP000705.1-201ENST00000454567 350 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC244505.3-201ENST00000454598 187 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC097462.2-201ENST00000504623 481 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 CDC42P4-201ENST00000510507 563 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 TBCAP3-201ENST00000512475 312 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC096725.1-201ENST00000514266 313 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC023632.1-201ENST00000518463 375 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 CKS1BP7-201ENST00000522230 235 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 COX6CP8-201ENST00000522620 226 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC044913.1-201ENST00000557200 430 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC093519.1-201ENST00000566109 298 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 MIR5194-201ENST00000582634 120 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC008507.2-201ENST00000588402 1176 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC060766.3-201ENST00000591442 263 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 HSPE1P7-201ENST00000604681 321 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC092574.1-201ENST00000609771 420 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC006386.2-201ENST00000624491 75 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC012005.1-201ENST00000624575 75 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 AC135776.4-201ENST00000624300 1904 ntBASIC2.64□□□□□ -1.99
CDKL3Q8IVW4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
CDKL3Q8IVW4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms