Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MIR3976-201ENST00000606807 139 ntBASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 MIR5701-2-201ENST00000615634 82 ntBASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 MIR376A1-201ENST00000616574 68 ntBASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 FP236240.3-201ENST00000623061 327 ntBASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 AC132068.1-201ENST00000623805 459 ntBASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 EOGT-210ENST00000615922 1931 ntBASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD3Q7Z3D4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 RNU6-371P-201ENST00000364283 108 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 RNVU1-3-201ENST00000364313 161 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 RNU2-20P-201ENST00000410425 191 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 BX842559.1-201ENST00000419615 532 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 LINC02210-201ENST00000444561 288 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 AZGP1P2-201ENST00000454506 345 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 VN1R105P-201ENST00000486595 910 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 RPL30P11-201ENST00000495304 339 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 GLUD1P3-202ENST00000508551 200 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 OR51K1P-201ENST00000510214 950 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 RNU6-677P-201ENST00000516914 101 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 SCARNA24.2-201ENST00000516968 130 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 RNA5SP230-201ENST00000517039 122 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 IGKV2-18-201ENST00000522607 343 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 AC025884.1-201ENST00000556034 378 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 AC136932.1-201ENST00000574771 208 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 CPDP1-201ENST00000579660 283 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 AP005403.1-201ENST00000579720 229 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 OR1M4P-201ENST00000589199 287 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 AC068790.4-201ENST00000602474 263 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 SUMO2P15-201ENST00000604285 278 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 AP001284.1-201ENST00000528393 2118 ntBASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD3Q7Z3D4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AL360270.2-201ENST00000562952 5985 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AC092376.2-201ENST00000622621 4116 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 RNA5SP234-201ENST00000363916 119 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 RNU6-1317P-201ENST00000364582 104 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 RPL21P41-201ENST00000459863 264 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 RPL37P6-201ENST00000460682 294 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 BX510359.5-201ENST00000515651 304 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 RN7SKP60-201ENST00000516985 239 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 SULT1C2P2-201ENST00000562517 294 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 MIR4300-201ENST00000581016 96 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AC067852.3-201ENST00000589177 561 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 OR7E18P-201ENST00000592589 702 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 MIR6864-201ENST00000617935 70 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 AC138965.3-201ENST00000623875 498 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 CYP4F35P-202ENST00000636121 390 ntBASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD3Q7Z3D4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms