Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 SNORD116-26-201ENST00000516006 96 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 RN7SKP96-201ENST00000516948 297 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 RNU6-445P-201ENST00000516949 107 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 RNU6-201P-201ENST00000517100 61 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 MIR2116-201ENST00000517221 80 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AL845331.3-202ENST00000562856 261 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 MIR4512-201ENST00000583257 77 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 MIR6875-201ENST00000617506 72 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 AC139792.3-201ENST00000623525 224 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 MIR3662-201ENST00000637030 95 ntBASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
ZNF549Q6P9A3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC024560.2-201ENST00000507981 1497 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 RNU4-1-201ENST00000363925 141 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 Y_RNA.263-201ENST00000364659 114 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 MIR649-201ENST00000384843 97 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 snosnR66.1-201ENST00000391095 99 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC016769.3-201ENST00000396562 315 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 PPIAP31-201ENST00000405422 495 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AL603766.1-201ENST00000407763 664 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC078974.1-201ENST00000411597 223 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 NUP35P2-201ENST00000416748 943 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 RPL36P19-201ENST00000430744 301 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 IFNWP4-201ENST00000453148 294 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 MTND1P12-201ENST00000455231 147 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 RPL39P36-201ENST00000490784 156 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 IGLVIV-53-201ENST00000520107 367 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC022616.6-201ENST00000520479 119 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 OR8L1P-201ENST00000534005 955 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC123904.3-201ENST00000547218 814 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 CBX3P5-201ENST00000552017 521 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC007224.1-201ENST00000564410 144 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC009101.1-201ENST00000568135 242 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 RN7SL703P-201ENST00000578485 302 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 RNU6-87P-201ENST00000607561 108 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC093788.1-201ENST00000609356 927 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 BMS1P21-201ENST00000634565 365 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AC244205.2-202ENST00000635781 342 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 NUP58P1-201ENST00000502546 1738 ntBASIC3.73□□□□□ -1.81
ZNF549Q6P9A3 AL049780.3-201ENST00000624612 1583 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 AL356489.2-201ENST00000566968 3528 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 XGY1-201ENST00000381172 446 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 RNU6-877P-201ENST00000383868 107 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 RNU6-1011P-201ENST00000384668 107 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 DSTNP4-201ENST00000399472 474 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 AL133384.1-201ENST00000412744 351 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 ZNF90P2-204ENST00000419323 1075 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 RPL7P28-201ENST00000437739 740 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 FAM103A2P-201ENST00000444122 354 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 RPL23AP20-201ENST00000447965 421 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 PMCHL2-203ENST00000457791 237 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 AC114786.4-201ENST00000508771 728 ntBASIC3.72□□□□□ -1.81
ZNF549Q6P9A3 AC010493.1-201ENST00000513479 292 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms