Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 DDX10P1-201ENST00000448545 1933 ntBASIC4.6□□□□□ -1.67
HLA-DQA1Q5Y7H0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC139713.2-215ENST00000641428 5037 ntBASIC4.6□□□□□ -1.67
HLA-DQA1Q5Y7H0 INTS6P1-201ENST00000504674 2530 ntBASIC4.6□□□□□ -1.67
HLA-DQA1Q5Y7H0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNA5SP123-201ENST00000363244 119 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 Y_RNA.193-201ENST00000363979 102 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 Y_RNA.452-201ENST00000384202 108 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 Y_RNA.463-201ENST00000384271 102 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 Y_RNA.527-201ENST00000384573 102 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC013442.1-201ENST00000397347 228 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AL139039.1-201ENST00000401900 692 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 NDUFS5P1-201ENST00000405668 289 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNA5SP56-201ENST00000410277 118 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 PABPC1P7-201ENST00000413177 1513 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC099677.1-201ENST00000420575 175 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 HMGN2P27-201ENST00000427352 270 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RPS27P18-201ENST00000431701 247 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AL353597.2-202ENST00000434901 373 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RHOT1P3-201ENST00000436571 331 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC112498.1-201ENST00000444401 332 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 MRPL48P1-201ENST00000445390 636 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RPL12P25-201ENST00000455592 494 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 PNPT1P2-201ENST00000456768 2050 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC117503.1-201ENST00000472241 394 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 MTCO1P24-201ENST00000515438 1558 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 Y_RNA.661-201ENST00000516003 99 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNU2-69P-201ENST00000516061 100 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 SNORA14.1-201ENST00000516113 141 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNU6-390P-201ENST00000516259 103 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNU6-764P-201ENST00000516396 105 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 Y_RNA.689-201ENST00000516589 107 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNU6-1332P-201ENST00000516666 104 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNU6-1016P-201ENST00000516689 94 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNA5SP230-201ENST00000517039 122 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 BNIP3P16-201ENST00000589779 534 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC006254.3-201ENST00000603353 884 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AL355598.1-201ENST00000604169 202 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC022418.1-201ENST00000624118 445 ntBASIC4.59□□□□□ -1.67
HLA-DQA1Q5Y7H0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DQA1Q5Y7H0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DQA1Q5Y7H0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 ADAM5-202ENST00000399789 1942 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 RN7SKP95-201ENST00000362860 303 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNU6-593P-201ENST00000364716 112 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNU6-715P-201ENST00000365204 103 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.399-201ENST00000383955 105 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.404-201ENST00000383978 102 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 MIR135A2-201ENST00000384854 100 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPLP0P7-201ENST00000416050 667 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPL7P10-201ENST00000417407 739 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 E2F6P2-201ENST00000420708 748 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 FAR2P4-202ENST00000425399 584 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPL35AP21-201ENST00000437667 333 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 CYCSP43-201ENST00000438233 310 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNU7-167P-201ENST00000459160 62 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 COX6B1P2-201ENST00000489624 230 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPL7P23-201ENST00000493874 747 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC073073.1-201ENST00000493920 463 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC116337.1-201ENST00000509680 687 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 SNORA25.10-201ENST00000515926 124 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.670-201ENST00000516255 105 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1Q5Y7H0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms