Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 RPL36AP51-201ENST00000487216 318 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC093278.1-201ENST00000494700 600 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 RPS27AP13-201ENST00000498403 237 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 RNU2-10P-201ENST00000516375 211 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 RNU6-798P-201ENST00000516912 103 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC104383.1-201ENST00000530297 370 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 BNIP3P5-201ENST00000562290 498 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AL136363.1-201ENST00000605349 337 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC004067.1-201ENST00000608733 700 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 AC006338.1-201ENST00000618453 749 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 RNA5SP196-201ENST00000625967 102 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 MIR492-201ENST00000638676 116 ntBASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PTCHD3Q3KNS1 CR848007.1-201ENST00000442354 1699 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 MIR372-201ENST00000362225 67 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 RNU6-1155P-201ENST00000363554 107 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AL583834.1-201ENST00000406943 343 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 RPS12P23-201ENST00000419579 400 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AL353193.1-201ENST00000421444 268 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 ELOCP14-201ENST00000428070 331 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 ELOCP7-201ENST00000439968 331 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC016696.1-201ENST00000446949 318 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC140076.1-201ENST00000449897 361 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC133473.1-201ENST00000455173 299 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC027673.1-201ENST00000456245 405 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 RPL36AP13-201ENST00000457490 317 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 RNA5SP246-201ENST00000458909 119 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC135721.1-201ENST00000497954 479 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC025554.1-201ENST00000505641 188 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC099522.1-202ENST00000514718 367 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 RNU6-410P-201ENST00000517006 107 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC018630.1-201ENST00000541376 925 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 HMGB1P6-201ENST00000569046 646 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 MIR548S-201ENST00000581352 82 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 RN7SL600P-201ENST00000581811 299 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC012669.1-201ENST00000603209 283 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AC099654.14-201ENST00000638599 341 ntBASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD3Q3KNS1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
PTCHD3Q3KNS1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.03□□□□□ -1.77
PTCHD3Q3KNS1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 AC116667.1-201ENST00000604855 2072 ntBASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 HSPE1P11-201ENST00000339579 310 ntBASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 RNU6-511P-201ENST00000363496 107 ntBASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 RNU6-483P-201ENST00000384088 108 ntBASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 RNU6-432P-201ENST00000384196 109 ntBASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 RNU6-712P-201ENST00000410558 100 ntBASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 OR4K11P-201ENST00000431829 904 ntBASIC4.02□□□□□ -1.77
PTCHD3Q3KNS1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms