Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC026427.2-201ENST00000506228 536 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.92□□□□□ -1.62
SSRP1Q08945 AC105417.1-201ENST00000514691 285 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 CENPUP1-201ENST00000526649 1202 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AC009643.1-201ENST00000532030 391 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.92□□□□□ -1.62
SSRP1Q08945 ADI1P3-201ENST00000549509 470 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AL121603.1-201ENST00000553815 142 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 CYP4A43P-201ENST00000568156 121 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.92□□□□□ -1.62
SSRP1Q08945 AC015917.1-201ENST00000579654 510 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSRP1Q08945 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.92□□□□□ -1.62
SSRP1Q08945 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.92□□□□□ -1.62
SSRP1Q08945 FAM27D1-201ENST00000612308 341 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.92□□□□□ -1.62
SSRP1Q08945 AL731566.2-201ENST00000618971 317 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AC104985.2-201ENST00000620598 500 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AC006504.8-201ENST00000621046 635 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AC011944.2-201ENST00000624440 683 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSRP1Q08945 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSRP1Q08945 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SSRP1Q08945 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SSRP1Q08945 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSRP1Q08945 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSRP1Q08945 MIR1179-201ENST00000408703 91 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 RNU6-373P-201ENST00000411247 98 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 RAB28P1-201ENST00000411517 641 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 SSXP9-201ENST00000417503 292 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.91□□□□□ -1.62
SSRP1Q08945 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.91□□□□□ -1.62
SSRP1Q08945 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.91□□□□□ -1.62
SSRP1Q08945 ATP5JP1-201ENST00000431631 322 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 USP9YP8-201ENST00000441913 500 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 MTCO3P45-201ENST00000443036 613 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.91□□□□□ -1.62
SSRP1Q08945 AC008481.1-201ENST00000463278 396 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 GMFBP1-201ENST00000467831 427 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 AP000852.1-201ENST00000472460 573 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 AC008958.1-201ENST00000511047 682 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 SNORD60.2-201ENST00000516883 86 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.91□□□□□ -1.62
SSRP1Q08945 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.91□□□□□ -1.62
SSRP1Q08945 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.91□□□□□ -1.62
SSRP1Q08945 AC125611.2-201ENST00000551907 647 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSRP1Q08945 TVP23BP1-201ENST00000557500 617 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.91□□□□□ -1.62
SSRP1Q08945 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.91□□□□□ -1.62
SSRP1Q08945 AC114781.5-201ENST00000615297 108 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 AL450472.3-201ENST00000615578 367 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 AC104260.1-201ENST00000616660 539 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 SNHG22-203ENST00000617833 660 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 MIR7641-1-201ENST00000627518 61 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.91□□□□□ -1.62
SSRP1Q08945 AC099654.5-201ENST00000636479 350 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.91□□□□□ -1.62
SSRP1Q08945 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SSRP1Q08945 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSRP1Q08945 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.91□□□□□ -1.62
SSRP1Q08945 AC000123.3-201ENST00000624029 4975 ntBASIC4.91□□□□□ -1.62
SSRP1Q08945 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSRP1Q08945 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSRP1Q08945 MTND5P17-201ENST00000418405 1603 ntBASIC4.9□□□□□ -1.62
SSRP1Q08945 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
SSRP1Q08945 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SSRP1Q08945 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSRP1Q08945 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSRP1Q08945 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSRP1Q08945 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSRP1Q08945 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSRP1Q08945 RNU6-797P-201ENST00000363101 109 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 SNORD3H-201ENST00000384486 214 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.9□□□□□ -1.63
SSRP1Q08945 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.9□□□□□ -1.63
SSRP1Q08945 AL513185.2-201ENST00000425543 193 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.9□□□□□ -1.63
SSRP1Q08945 RPL36AP6-201ENST00000435770 321 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 AC004866.2-201ENST00000438285 481 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 RPL23AP89-201ENST00000439324 255 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.9□□□□□ -1.63
SSRP1Q08945 RNU7-182P-201ENST00000459009 62 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 RPS20P20-201ENST00000460498 340 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 NIPA2P2-201ENST00000496376 1083 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 AC139783.2-201ENST00000504847 1145 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 AC006499.6-201ENST00000511169 607 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 RNU6-507P-201ENST00000516045 100 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.9□□□□□ -1.63
SSRP1Q08945 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.9□□□□□ -1.63
SSRP1Q08945 UBE2V2P2-201ENST00000587677 504 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 XIAPP1-201ENST00000603162 600 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 AC008945.2-201ENST00000606056 604 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 MIR432-201ENST00000606207 94 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 Y_RNA.804-201ENST00000615262 101 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 AC093648.1-201ENST00000623546 606 ntBASIC4.9□□□□□ -1.63
SSRP1Q08945 BMS1P21-201ENST00000634565 365 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms