Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KLRA1P-201ENST00000503499 986 ntBASIC1.78□□□□□ -2.12
UBA52P62987 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.78□□□□□ -2.12
UBA52P62987 MTCO3P44-201ENST00000510977 541 ntBASIC1.78□□□□□ -2.12
UBA52P62987 RNA5SP458-201ENST00000516188 119 ntBASIC1.78□□□□□ -2.12
UBA52P62987 MIR514B-201ENST00000516774 80 ntBASIC1.78□□□□□ -2.12
UBA52P62987 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UBA52P62987 MTND2P26-201ENST00000528255 1029 ntBASIC1.78□□□□□ -2.12
UBA52P62987 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.78□□□□□ -2.12
UBA52P62987 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.78□□□□□ -2.12
UBA52P62987 AL138976.2-201ENST00000563989 694 ntBASIC1.78□□□□□ -2.12
UBA52P62987 LRRC37A5P-203ENST00000580181 585 ntBASIC1.78□□□□□ -2.12
UBA52P62987 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.78□□□□□ -2.12
UBA52P62987 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.78□□□□□ -2.12
UBA52P62987 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
UBA52P62987 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.78□□□□□ -2.12
UBA52P62987 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.78□□□□□ -2.12
UBA52P62987 AC009831.4-201ENST00000620744 325 ntBASIC1.78□□□□□ -2.12
UBA52P62987 MIR6132-201ENST00000622083 109 ntBASIC1.78□□□□□ -2.12
UBA52P62987 AC012640.5-201ENST00000623897 319 ntBASIC1.78□□□□□ -2.12
UBA52P62987 AC093591.3-201ENST00000634516 308 ntBASIC1.78□□□□□ -2.12
UBA52P62987 AC110079.1-202ENST00000635213 138 ntBASIC1.78□□□□□ -2.12
UBA52P62987 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.77□□□□□ -2.13
UBA52P62987 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBA52P62987 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBA52P62987 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBA52P62987 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
UBA52P62987 RNA5SP88-201ENST00000365560 109 ntBASIC1.77□□□□□ -2.13
UBA52P62987 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.77□□□□□ -2.13
UBA52P62987 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBA52P62987 SNORA48.3-201ENST00000391081 134 ntBASIC1.77□□□□□ -2.13
UBA52P62987 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.77□□□□□ -2.13
UBA52P62987 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.77□□□□□ -2.13
UBA52P62987 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
UBA52P62987 AL512504.1-201ENST00000415494 778 ntBASIC1.77□□□□□ -2.13
UBA52P62987 NUP35P2-201ENST00000416748 943 ntBASIC1.77□□□□□ -2.13
UBA52P62987 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.77□□□□□ -2.13
UBA52P62987 AC018634.1-201ENST00000437554 401 ntBASIC1.77□□□□□ -2.13
UBA52P62987 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UBA52P62987 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.77□□□□□ -2.13
UBA52P62987 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.77□□□□□ -2.13
UBA52P62987 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.77□□□□□ -2.13
UBA52P62987 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.77□□□□□ -2.13
UBA52P62987 RPL5P13-201ENST00000462840 709 ntBASIC1.77□□□□□ -2.13
UBA52P62987 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.77□□□□□ -2.13
UBA52P62987 AC096571.1-202ENST00000506634 735 ntBASIC1.77□□□□□ -2.13
UBA52P62987 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.77□□□□□ -2.13
UBA52P62987 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.77□□□□□ -2.13
UBA52P62987 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.77□□□□□ -2.13
UBA52P62987 AC135628.1-201ENST00000568867 534 ntBASIC1.77□□□□□ -2.13
UBA52P62987 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.77□□□□□ -2.13
UBA52P62987 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
UBA52P62987 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.77□□□□□ -2.13
UBA52P62987 AC055764.2-201ENST00000610089 670 ntBASIC1.77□□□□□ -2.13
UBA52P62987 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
UBA52P62987 AL162233.1-201ENST00000620014 944 ntBASIC1.77□□□□□ -2.13
UBA52P62987 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.77□□□□□ -2.13
UBA52P62987 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
UBA52P62987 MTND5P29-201ENST00000458676 1807 ntBASIC1.77□□□□□ -2.13
UBA52P62987 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBA52P62987 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBA52P62987 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBA52P62987 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.76□□□□□ -2.13
UBA52P62987 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBA52P62987 AL356292.1-201ENST00000283110 373 ntBASIC1.76□□□□□ -2.13
UBA52P62987 SNORA67.3-201ENST00000384366 140 ntBASIC1.76□□□□□ -2.13
UBA52P62987 AP002784.2-201ENST00000397300 549 ntBASIC1.76□□□□□ -2.13
UBA52P62987 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.76□□□□□ -2.13
UBA52P62987 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.76□□□□□ -2.13
UBA52P62987 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.76□□□□□ -2.13
UBA52P62987 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.76□□□□□ -2.13
UBA52P62987 AC233279.1-201ENST00000455300 423 ntBASIC1.76□□□□□ -2.13
UBA52P62987 HMGN2P23-201ENST00000456759 269 ntBASIC1.76□□□□□ -2.13
UBA52P62987 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.76□□□□□ -2.13
UBA52P62987 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.76□□□□□ -2.13
UBA52P62987 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.76□□□□□ -2.13
UBA52P62987 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.76□□□□□ -2.13
UBA52P62987 Y_RNA.676-201ENST00000516393 96 ntBASIC1.76□□□□□ -2.13
UBA52P62987 NPM1P52-201ENST00000518264 846 ntBASIC1.76□□□□□ -2.13
UBA52P62987 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.76□□□□□ -2.13
UBA52P62987 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.76□□□□□ -2.13
UBA52P62987 MTCO1P40-201ENST00000574371 625 ntBASIC1.76□□□□□ -2.13
UBA52P62987 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.76□□□□□ -2.13
UBA52P62987 PCNAP1-202ENST00000595299 752 ntBASIC1.76□□□□□ -2.13
UBA52P62987 KC877982.1-201ENST00000602313 470 ntBASIC1.76□□□□□ -2.13
UBA52P62987 AC018755.4-201ENST00000619715 454 ntBASIC1.76□□□□□ -2.13
UBA52P62987 AC015726.3-201ENST00000624501 418 ntBASIC1.76□□□□□ -2.13
UBA52P62987 OR4G2P-202ENST00000641004 1759 ntBASIC1.76□□□□□ -2.13
UBA52P62987 AC022336.2-201ENST00000568966 2538 ntBASIC1.76□□□□□ -2.13
UBA52P62987 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
UBA52P62987 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.75□□□□□ -2.13
UBA52P62987 AC009487.4-201ENST00000624969 3585 ntBASIC1.75□□□□□ -2.13
UBA52P62987 RNU6-1159P-201ENST00000362933 107 ntBASIC1.75□□□□□ -2.13
UBA52P62987 RNU6-697P-201ENST00000363348 107 ntBASIC1.75□□□□□ -2.13
UBA52P62987 GPM6BP3-201ENST00000442797 145 ntBASIC1.75□□□□□ -2.13
UBA52P62987 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.75□□□□□ -2.13
UBA52P62987 AP002371.1-201ENST00000463604 433 ntBASIC1.75□□□□□ -2.13
UBA52P62987 AC015908.1-201ENST00000478739 476 ntBASIC1.75□□□□□ -2.13
UBA52P62987 AC090453.1-201ENST00000495560 436 ntBASIC1.75□□□□□ -2.13
UBA52P62987 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.75□□□□□ -2.13
UBA52P62987 RNA5SP200-201ENST00000516360 103 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms