Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC011471.1-201ENST00000585766 187 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC006270.3-201ENST00000605967 1036 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AP000254.1-201ENST00000609934 520 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC138932.5-201ENST00000617759 563 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC018692.3-201ENST00000623929 123 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC008568.2-201ENST00000623862 2313 ntBASIC3.17□□□□□ -1.9
SRP54P61011 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.17□□□□□ -1.9
SRP54P61011 AC106754.1-201ENST00000562632 1513 ntBASIC3.17□□□□□ -1.9
SRP54P61011 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP54P61011 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SRP54P61011 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SRP54P61011 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
SRP54P61011 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SRP54P61011 MTCO1P9-201ENST00000505577 1534 ntBASIC3.16□□□□□ -1.9
SRP54P61011 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SRP54P61011 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SRP54P61011 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SRP54P61011 AL161781.1-201ENST00000354277 403 ntBASIC3.16□□□□□ -1.9
SRP54P61011 MIR148B-201ENST00000362252 99 ntBASIC3.16□□□□□ -1.9
SRP54P61011 RNU6-906P-201ENST00000384700 70 ntBASIC3.16□□□□□ -1.9
SRP54P61011 AL354719.1-201ENST00000406535 843 ntBASIC3.16□□□□□ -1.9
SRP54P61011 RNA5SP107-201ENST00000411358 122 ntBASIC3.16□□□□□ -1.9
SRP54P61011 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SRP54P61011 MRPL50P2-201ENST00000416821 482 ntBASIC3.16□□□□□ -1.9
SRP54P61011 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.16□□□□□ -1.9
SRP54P61011 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 AC084290.1-201ENST00000434995 374 ntBASIC3.16□□□□□ -1.9
SRP54P61011 SNRPEP7-201ENST00000438350 220 ntBASIC3.16□□□□□ -1.9
SRP54P61011 RPL26P6-201ENST00000440913 438 ntBASIC3.16□□□□□ -1.9
SRP54P61011 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP54P61011 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP54P61011 DUXAP8-207ENST00000456786 622 ntBASIC3.16□□□□□ -1.9
SRP54P61011 SNORD121B-201ENST00000458838 81 ntBASIC3.16□□□□□ -1.9
SRP54P61011 RPL27AP5-201ENST00000469428 449 ntBASIC3.16□□□□□ -1.9
SRP54P61011 AC104563.1-201ENST00000476147 376 ntBASIC3.16□□□□□ -1.9
SRP54P61011 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 AC021146.8-201ENST00000507455 733 ntBASIC3.16□□□□□ -1.9
SRP54P61011 AC109464.2-201ENST00000510242 943 ntBASIC3.16□□□□□ -1.9
SRP54P61011 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
SRP54P61011 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
SRP54P61011 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SRP54P61011 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.16□□□□□ -1.9
SRP54P61011 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP54P61011 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.16□□□□□ -1.9
SRP54P61011 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP54P61011 MTND1P8-201ENST00000571424 950 ntBASIC3.16□□□□□ -1.9
SRP54P61011 AC011260.1-201ENST00000578420 472 ntBASIC3.16□□□□□ -1.9
SRP54P61011 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP54P61011 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP54P61011 AC006386.1-201ENST00000619436 415 ntBASIC3.16□□□□□ -1.9
SRP54P61011 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP54P61011 AC090772.4-201ENST00000623599 362 ntBASIC3.16□□□□□ -1.9
SRP54P61011 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SRP54P61011 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.15□□□□□ -1.9
SRP54P61011 MAPK10-322ENST00000641485 4530 ntBASIC3.15□□□□□ -1.9
SRP54P61011 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SRP54P61011 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SRP54P61011 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SRP54P61011 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRP54P61011 ZNF29P-201ENST00000225587 168 ntBASIC3.15□□□□□ -1.91
SRP54P61011 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRP54P61011 MIR422A-201ENST00000362286 90 ntBASIC3.15□□□□□ -1.91
SRP54P61011 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.15□□□□□ -1.91
SRP54P61011 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SRP54P61011 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SRP54P61011 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
SRP54P61011 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 RPS25P9-201ENST00000435591 252 ntBASIC3.15□□□□□ -1.91
SRP54P61011 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 CST9LP2-201ENST00000437612 320 ntBASIC3.15□□□□□ -1.91
SRP54P61011 TRIM60P18-201ENST00000441518 828 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.15□□□□□ -1.91
SRP54P61011 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.15□□□□□ -1.91
SRP54P61011 ELOCP23-201ENST00000452014 332 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.15□□□□□ -1.91
SRP54P61011 AC108729.1-201ENST00000487812 947 ntBASIC3.15□□□□□ -1.91
SRP54P61011 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRP54P61011 AC010587.2-201ENST00000511727 448 ntBASIC3.15□□□□□ -1.91
SRP54P61011 GMPSP1-201ENST00000514075 579 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AC026801.2-201ENST00000515352 425 ntBASIC3.15□□□□□ -1.91
SRP54P61011 RNA5SP341-201ENST00000516261 117 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.15□□□□□ -1.91
SRP54P61011 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.15□□□□□ -1.91
SRP54P61011 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP54P61011 NBEAP1-201ENST00000554452 979 ntBASIC3.15□□□□□ -1.91
SRP54P61011 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms