Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA1P56159 RPL21P109-201ENST00000422213 475 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 MTCO1P39-201ENST00000426148 480 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
GFRA1P56159 RPL32P28-201ENST00000443577 397 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 AC112498.1-201ENST00000444401 332 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.49□□□□□ -1.69
GFRA1P56159 Y_RNA.653-201ENST00000459091 95 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 SNORD108-201ENST00000459332 71 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 RPS17P2-201ENST00000461663 408 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 HSPE1P6-201ENST00000479457 291 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.49□□□□□ -1.69
GFRA1P56159 RNU6-1069P-201ENST00000516612 133 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 CYCSP27-201ENST00000527643 293 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.49□□□□□ -1.69
GFRA1P56159 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.49□□□□□ -1.69
GFRA1P56159 TVP23CP2-201ENST00000571473 623 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 FAM60BP-201ENST00000578364 658 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 MIR5692C1-201ENST00000585309 91 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.49□□□□□ -1.69
GFRA1P56159 AC087783.2-201ENST00000605070 562 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 FAM25E-202ENST00000608562 189 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 AC133104.2-201ENST00000615272 193 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA1P56159 MTCO1P12-201ENST00000414273 1543 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 SDAD1P2-201ENST00000441308 2028 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA1P56159 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA1P56159 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
GFRA1P56159 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA1P56159 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.49□□□□□ -1.69
GFRA1P56159 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
GFRA1P56159 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
GFRA1P56159 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
GFRA1P56159 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.48□□□□□ -1.69
GFRA1P56159 SAMMSON-226ENST00000642089 1582 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
GFRA1P56159 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.48□□□□□ -1.69
GFRA1P56159 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
GFRA1P56159 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
GFRA1P56159 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA1P56159 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.48□□□□□ -1.69
GFRA1P56159 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA1P56159 RNU6-562P-201ENST00000362731 107 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 Y_RNA.187-201ENST00000363918 113 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 RNU6-474P-201ENST00000384243 107 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 RNU6-601P-201ENST00000384540 107 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 MIR606-201ENST00000384851 96 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 RPS4XP7-201ENST00000406274 780 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC079780.1-201ENST00000428259 207 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 NRBF2P3-201ENST00000432731 865 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 AC093414.1-201ENST00000434712 514 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.48□□□□□ -1.69
GFRA1P56159 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.48□□□□□ -1.69
GFRA1P56159 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.48□□□□□ -1.69
GFRA1P56159 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.48□□□□□ -1.69
GFRA1P56159 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA1P56159 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
GFRA1P56159 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.48□□□□□ -1.69
GFRA1P56159 SNRPGP17-201ENST00000603780 214 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 AL355365.1-201ENST00000616480 294 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.48□□□□□ -1.69
GFRA1P56159 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA1P56159 AC092376.2-201ENST00000622621 4116 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA1P56159 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
GFRA1P56159 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA1P56159 AC112198.2-201ENST00000426589 6996 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA1P56159 AC011755.1-201ENST00000623763 2049 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.48□□□□□ -1.69
GFRA1P56159 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.48□□□□□ -1.69
GFRA1P56159 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.47□□□□□ -1.69
GFRA1P56159 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.47□□□□□ -1.69
GFRA1P56159 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.47□□□□□ -1.69
GFRA1P56159 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
GFRA1P56159 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GFRA1P56159 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GFRA1P56159 AL450345.1-202ENST00000605741 3881 ntBASIC4.47□□□□□ -1.69
GFRA1P56159 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
GFRA1P56159 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GFRA1P56159 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GFRA1P56159 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GFRA1P56159 RNU6-1188P-201ENST00000363795 107 ntBASIC4.47□□□□□ -1.69
GFRA1P56159 RNU6-335P-201ENST00000364563 113 ntBASIC4.47□□□□□ -1.69
GFRA1P56159 RNU6-593P-201ENST00000364716 112 ntBASIC4.47□□□□□ -1.69
GFRA1P56159 U3.15-201ENST00000365398 212 ntBASIC4.47□□□□□ -1.69
GFRA1P56159 RNA5SP87-201ENST00000384155 118 ntBASIC4.47□□□□□ -1.69
GFRA1P56159 AL139397.2-201ENST00000404529 772 ntBASIC4.47□□□□□ -1.69
GFRA1P56159 RN7SKP16-201ENST00000410180 299 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms