Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 XKRY-201ENST00000510392 1100 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX1P55347 AC074250.1-201ENST00000511117 192 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 SNORA9.3-201ENST00000516383 129 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 SNORA70.16-201ENST00000516390 95 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.78□□□□□ -1.96
PKNOX1P55347 AC022861.1-201ENST00000522981 663 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AP001804.3-201ENST00000525146 880 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 OR10V3P-201ENST00000525712 725 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 HPRT1P3-201ENST00000539521 576 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 ELOCP31-201ENST00000540463 467 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.78□□□□□ -1.96
PKNOX1P55347 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX1P55347 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX1P55347 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX1P55347 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX1P55347 MIR4444-1-201ENST00000581696 74 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 MIR4444-2-201ENST00000584390 74 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AC006539.2-201ENST00000601729 572 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 YPEL5P2-201ENST00000605553 359 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AL390208.1-201ENST00000605885 644 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AL391834.2-201ENST00000609982 546 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AC004696.1-201ENST00000614345 607 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AL138880.2-201ENST00000616214 239 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AC084757.4-201ENST00000616350 526 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AL596245.1-201ENST00000618994 362 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AP003122.6-201ENST00000623831 495 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 AC090897.3-201ENST00000636973 1157 ntBASIC2.78□□□□□ -1.96
PKNOX1P55347 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.96
PKNOX1P55347 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.78□□□□□ -1.96
PKNOX1P55347 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.78□□□□□ -1.97
PKNOX1P55347 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.77□□□□□ -1.97
PKNOX1P55347 AC000403.1-201ENST00000613696 3585 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 NACA3P-201ENST00000359690 648 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 SNORA71.3-201ENST00000362582 128 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 RNU6-560P-201ENST00000364007 108 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 RNU6-413P-201ENST00000384115 107 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 MIR493-201ENST00000385254 89 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 RPS4XP3-201ENST00000398541 413 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AL136310.1-201ENST00000404926 654 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 RPS3AP25-201ENST00000411660 793 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 MTATP6P20-201ENST00000414147 562 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 TPMTP2-201ENST00000414372 726 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 BEND7P1-201ENST00000422058 457 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.77□□□□□ -1.97
PKNOX1P55347 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.77□□□□□ -1.97
PKNOX1P55347 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.77□□□□□ -1.97
PKNOX1P55347 YME1L1P1-201ENST00000429435 297 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 MTCO2P25-201ENST00000447065 681 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AL590664.1-201ENST00000448065 339 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 RPL37P4-201ENST00000448908 268 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AL359385.1-201ENST00000456509 365 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 RNU7-136P-201ENST00000458819 69 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 RNA5SP310-201ENST00000459084 116 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.77□□□□□ -1.97
PKNOX1P55347 AC111000.2-201ENST00000507775 550 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AC017037.2-201ENST00000513850 890 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AC009812.2-201ENST00000517657 457 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.77□□□□□ -1.97
PKNOX1P55347 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PKNOX1P55347 AP002404.1-201ENST00000532005 451 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AL133271.1-201ENST00000538229 291 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.77□□□□□ -1.97
PKNOX1P55347 MTCYBP23-201ENST00000558717 1102 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 H3F3AP1-201ENST00000559984 334 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.77□□□□□ -1.97
PKNOX1P55347 MIR3605-201ENST00000583214 100 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 BNIP3P26-201ENST00000600827 554 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 DUXAP11-201ENST00000603858 526 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AC022306.3-201ENST00000619930 550 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AC091046.2-201ENST00000620775 665 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 MIR6075-201ENST00000620782 95 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 AC099654.9-201ENST00000637055 678 ntBASIC2.77□□□□□ -1.97
PKNOX1P55347 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PKNOX1P55347 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PKNOX1P55347 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PKNOX1P55347 MIR26A1-201ENST00000362205 77 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 SNORD116.1-201ENST00000365628 92 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 MIR34B-201ENST00000385076 84 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PKNOX1P55347 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PKNOX1P55347 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.76□□□□□ -1.97
PKNOX1P55347 AL513043.1-201ENST00000439124 535 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 EEF1A1P39-201ENST00000440791 250 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 AC007327.1-201ENST00000447461 264 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 ZNF886P-201ENST00000450781 723 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.76□□□□□ -1.97
PKNOX1P55347 MTCO3P11-201ENST00000455103 774 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 AC104472.2-201ENST00000469035 601 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.76□□□□□ -1.97
PKNOX1P55347 AC083906.5-201ENST00000503722 328 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.76□□□□□ -1.97
PKNOX1P55347 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.76□□□□□ -1.97
PKNOX1P55347 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.76□□□□□ -1.97
PKNOX1P55347 AC098799.2-201ENST00000509466 868 ntBASIC2.76□□□□□ -1.97
PKNOX1P55347 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms