Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC108734.1-201ENST00000439549 399 ntBASIC3.17□□□□□ -1.9
SMSP52788 FGF7P5-201ENST00000441829 291 ntBASIC3.17□□□□□ -1.9
SMSP52788 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.17□□□□□ -1.9
SMSP52788 AL592447.1-201ENST00000447592 540 ntBASIC3.17□□□□□ -1.9
SMSP52788 AL590664.1-201ENST00000448065 339 ntBASIC3.17□□□□□ -1.9
SMSP52788 MTCO1P27-201ENST00000448269 226 ntBASIC3.17□□□□□ -1.9
SMSP52788 AC140076.1-201ENST00000449897 361 ntBASIC3.17□□□□□ -1.9
SMSP52788 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.17□□□□□ -1.9
SMSP52788 AC020699.1-201ENST00000505161 445 ntBASIC3.17□□□□□ -1.9
SMSP52788 SNORA31.1-201ENST00000515993 133 ntBASIC3.17□□□□□ -1.9
SMSP52788 SNORA31.5-201ENST00000516190 133 ntBASIC3.17□□□□□ -1.9
SMSP52788 MIR2276-201ENST00000516886 89 ntBASIC3.17□□□□□ -1.9
SMSP52788 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.17□□□□□ -1.9
SMSP52788 AP001372.4-201ENST00000524889 472 ntBASIC3.17□□□□□ -1.9
SMSP52788 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.17□□□□□ -1.9
SMSP52788 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.17□□□□□ -1.9
SMSP52788 DUXAP1-201ENST00000556632 463 ntBASIC3.17□□□□□ -1.9
SMSP52788 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.17□□□□□ -1.9
SMSP52788 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.17□□□□□ -1.9
SMSP52788 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.17□□□□□ -1.9
SMSP52788 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.17□□□□□ -1.9
SMSP52788 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.17□□□□□ -1.9
SMSP52788 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
SMSP52788 AL158042.1-201ENST00000605338 460 ntBASIC3.17□□□□□ -1.9
SMSP52788 RNU6-88P-201ENST00000606801 100 ntBASIC3.17□□□□□ -1.9
SMSP52788 AL158211.4-201ENST00000606988 584 ntBASIC3.17□□□□□ -1.9
SMSP52788 MIR8057-201ENST00000620957 69 ntBASIC3.17□□□□□ -1.9
SMSP52788 AP002782.1-201ENST00000623107 614 ntBASIC3.17□□□□□ -1.9
SMSP52788 AC068787.1-201ENST00000623908 691 ntBASIC3.17□□□□□ -1.9
SMSP52788 AC079228.1-201ENST00000624774 1049 ntBASIC3.17□□□□□ -1.9
SMSP52788 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SMSP52788 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.17□□□□□ -1.9
SMSP52788 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMSP52788 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMSP52788 AC005832.2-201ENST00000538921 1430 ntBASIC3.17□□□□□ -1.9
SMSP52788 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMSP52788 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SMSP52788 ZNF833P-201ENST00000424938 1494 ntBASIC3.16□□□□□ -1.9
SMSP52788 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMSP52788 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMSP52788 RNU4-35P-201ENST00000362588 141 ntBASIC3.16□□□□□ -1.9
SMSP52788 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
SMSP52788 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMSP52788 MIR128-1-201ENST00000384921 82 ntBASIC3.16□□□□□ -1.9
SMSP52788 RPS4XP3-201ENST00000398541 413 ntBASIC3.16□□□□□ -1.9
SMSP52788 RN7SKP266-201ENST00000410232 287 ntBASIC3.16□□□□□ -1.9
SMSP52788 MTND1P21-201ENST00000412991 285 ntBASIC3.16□□□□□ -1.9
SMSP52788 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.16□□□□□ -1.9
SMSP52788 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.16□□□□□ -1.9
SMSP52788 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
SMSP52788 AC083875.1-201ENST00000419509 405 ntBASIC3.16□□□□□ -1.9
SMSP52788 MTCO2P21-201ENST00000419780 677 ntBASIC3.16□□□□□ -1.9
SMSP52788 HSPE1P1-201ENST00000421494 318 ntBASIC3.16□□□□□ -1.9
SMSP52788 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.16□□□□□ -1.9
SMSP52788 DPPA2P1-201ENST00000428060 556 ntBASIC3.16□□□□□ -1.9
SMSP52788 MTND1P32-201ENST00000433043 938 ntBASIC3.16□□□□□ -1.9
SMSP52788 NDUFB4P6-201ENST00000436819 366 ntBASIC3.16□□□□□ -1.9
SMSP52788 THAP5P1-201ENST00000439089 262 ntBASIC3.16□□□□□ -1.9
SMSP52788 Z73417.1-201ENST00000447373 778 ntBASIC3.16□□□□□ -1.9
SMSP52788 AC025518.1-201ENST00000479856 347 ntBASIC3.16□□□□□ -1.9
SMSP52788 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SMSP52788 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.16□□□□□ -1.9
SMSP52788 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.16□□□□□ -1.9
SMSP52788 AC239860.2-201ENST00000525886 270 ntBASIC3.16□□□□□ -1.9
SMSP52788 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.16□□□□□ -1.9
SMSP52788 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.16□□□□□ -1.9
SMSP52788 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.16□□□□□ -1.9
SMSP52788 AC011260.1-201ENST00000578420 472 ntBASIC3.16□□□□□ -1.9
SMSP52788 AC008507.1-201ENST00000587506 734 ntBASIC3.16□□□□□ -1.9
SMSP52788 AC135507.2-201ENST00000612443 309 ntBASIC3.16□□□□□ -1.9
SMSP52788 AL136981.2-201ENST00000617319 734 ntBASIC3.16□□□□□ -1.9
SMSP52788 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.16□□□□□ -1.9
SMSP52788 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SMSP52788 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
SMSP52788 ZNF542P-204ENST00000482727 1305 ntBASIC3.16□□□□□ -1.9
SMSP52788 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMSP52788 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMSP52788 AC087359.1-201ENST00000508335 1740 ntBASIC3.16□□□□□ -1.9
SMSP52788 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SMSP52788 AP000526.1-201ENST00000603308 1388 ntBASIC3.15□□□□□ -1.9
SMSP52788 AL365361.1-201ENST00000566942 3481 ntBASIC3.15□□□□□ -1.9
SMSP52788 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SMSP52788 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SMSP52788 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMSP52788 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
SMSP52788 RNU6-931P-201ENST00000363850 107 ntBASIC3.15□□□□□ -1.91
SMSP52788 SNORA4.1-201ENST00000364263 144 ntBASIC3.15□□□□□ -1.91
SMSP52788 RNU4-28P-201ENST00000364739 141 ntBASIC3.15□□□□□ -1.91
SMSP52788 RNU6-744P-201ENST00000365557 107 ntBASIC3.15□□□□□ -1.91
SMSP52788 RNU6-1316P-201ENST00000384242 108 ntBASIC3.15□□□□□ -1.91
SMSP52788 U3.26-201ENST00000391236 204 ntBASIC3.15□□□□□ -1.91
SMSP52788 AL356421.1-201ENST00000403255 413 ntBASIC3.15□□□□□ -1.91
SMSP52788 PIGPP2-201ENST00000411569 458 ntBASIC3.15□□□□□ -1.91
SMSP52788 AC126124.2-201ENST00000413542 321 ntBASIC3.15□□□□□ -1.91
SMSP52788 HSFY4P-201ENST00000415994 1181 ntBASIC3.15□□□□□ -1.91
SMSP52788 NDUFB4P7-201ENST00000423198 363 ntBASIC3.15□□□□□ -1.91
SMSP52788 TMEM167AP1-201ENST00000423409 219 ntBASIC3.15□□□□□ -1.91
SMSP52788 ATP5JP1-201ENST00000431631 322 ntBASIC3.15□□□□□ -1.91
SMSP52788 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.15□□□□□ -1.91
SMSP52788 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms