Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 U6.98-201ENST00000637157 84 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AL392088.2-201ENST00000637607 285 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 NCAPGP1-201ENST00000505112 1814 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AC138915.3-201ENST00000562908 1389 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AL049781.1-201ENST00000623195 3585 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCNKAP51800 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.61□□□□□ -1.83
CLCNKAP51800 AC091152.2-201ENST00000591628 2569 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.61□□□□□ -1.83
CLCNKAP51800 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLCNKAP51800 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.61□□□□□ -1.83
CLCNKAP51800 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLCNKAP51800 RNA5SP258-201ENST00000362750 119 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 Y_RNA.505-201ENST00000384489 102 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 RPS20P2-201ENST00000402520 389 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 MTHFD2P2-201ENST00000407725 247 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 Y_RNA.598-201ENST00000410480 95 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.61□□□□□ -1.83
CLCNKAP51800 AL031779.1-201ENST00000415663 330 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 MTCO1P21-201ENST00000416634 589 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC092641.1-201ENST00000440229 772 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 ELOCP30-201ENST00000447108 299 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 MTND1P27-201ENST00000451117 902 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AL353691.1-201ENST00000451332 387 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.61□□□□□ -1.83
CLCNKAP51800 AC106707.2-201ENST00000484182 374 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.61□□□□□ -1.83
CLCNKAP51800 COX7A2P2-201ENST00000505291 250 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.61□□□□□ -1.83
CLCNKAP51800 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.61□□□□□ -1.83
CLCNKAP51800 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.61□□□□□ -1.83
CLCNKAP51800 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.61□□□□□ -1.83
CLCNKAP51800 EEF1B2P4-201ENST00000551398 348 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.61□□□□□ -1.83
CLCNKAP51800 AL391156.1-201ENST00000554965 554 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.61□□□□□ -1.83
CLCNKAP51800 AC034268.2-201ENST00000571784 482 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.61□□□□□ -1.83
CLCNKAP51800 BNIP3P8-201ENST00000597863 560 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC079089.3-201ENST00000603094 673 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC008739.3-201ENST00000603262 127 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC098614.4-201ENST00000607601 462 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AL590282.1-201ENST00000610379 1136 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC008250.2-201ENST00000615261 205 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC138932.5-201ENST00000617759 563 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CLCNKAP51800 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.61□□□□□ -1.83
CLCNKAP51800 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLCNKAP51800 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.61□□□□□ -1.83
CLCNKAP51800 AL034408.1-202ENST00000636088 415 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 AC119674.1-207ENST00000641355 633 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLCNKAP51800 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.61□□□□□ -1.83
CLCNKAP51800 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.61□□□□□ -1.83
CLCNKAP51800 AL672296.1-201ENST00000427780 2158 ntBASIC3.61□□□□□ -1.83
CLCNKAP51800 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLCNKAP51800 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLCNKAP51800 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLCNKAP51800 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.6□□□□□ -1.83
CLCNKAP51800 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CLCNKAP51800 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.6□□□□□ -1.83
CLCNKAP51800 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLCNKAP51800 RNU6-97P-201ENST00000363387 104 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 SNORD51-201ENST00000384320 80 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 Y_RNA.517-201ENST00000384551 106 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 RNU6-821P-201ENST00000390995 107 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLCNKAP51800 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.6□□□□□ -1.83
CLCNKAP51800 Y_RNA.608-201ENST00000410647 95 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC009237.5-201ENST00000414271 501 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC092447.6-201ENST00000414578 210 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 USP9YP13-201ENST00000417797 480 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC245054.1-201ENST00000420944 258 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.6□□□□□ -1.83
CLCNKAP51800 EZH2P1-201ENST00000431167 291 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.6□□□□□ -1.83
CLCNKAP51800 ATP5C1P1-201ENST00000441945 895 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC099563.1-201ENST00000456086 418 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 HMGB1P25-201ENST00000468402 607 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 RPL7L1P8-201ENST00000469911 741 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.6□□□□□ -1.83
CLCNKAP51800 AC006390.1-201ENST00000508068 283 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.6□□□□□ -1.83
CLCNKAP51800 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLCNKAP51800 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLCNKAP51800 RN7SKP244-201ENST00000516513 307 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 RNU6-405P-201ENST00000516637 110 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 RNU6-1073P-201ENST00000517182 106 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC022878.1-201ENST00000530684 149 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.6□□□□□ -1.83
CLCNKAP51800 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.6□□□□□ -1.83
CLCNKAP51800 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.6□□□□□ -1.83
CLCNKAP51800 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.6□□□□□ -1.83
CLCNKAP51800 MIR4528-201ENST00000577763 90 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC068790.6-201ENST00000602558 258 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms