Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC9A3P48764 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC9A3P48764 RNU6-50P-201ENST00000362356 103 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 U3.4-201ENST00000363352 213 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 RNU5E-5P-201ENST00000365379 116 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 RNU6-55P-201ENST00000411092 107 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 RNU6-954P-201ENST00000411355 107 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 RPL17P36-201ENST00000420302 549 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 MTATP6P4-201ENST00000427725 675 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.32□□□□□ -1.88
SLC9A3P48764 AC129850.1-201ENST00000436203 508 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 HMGB1P12-201ENST00000438594 598 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AL590365.1-201ENST00000450788 243 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 MTND1P9-201ENST00000453775 944 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC9A3P48764 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.32□□□□□ -1.88
SLC9A3P48764 AC108860.1-201ENST00000484521 383 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC068724.1-201ENST00000487100 792 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC135721.1-201ENST00000497954 479 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC9A3P48764 VN1R104P-201ENST00000505115 1009 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC109464.2-201ENST00000510242 943 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.32□□□□□ -1.88
SLC9A3P48764 RNU6-1003P-201ENST00000517099 105 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 SNORA31.22-201ENST00000517204 135 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 MIR2116-201ENST00000517221 80 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AP002748.2-201ENST00000528671 348 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AP000907.2-201ENST00000530827 353 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.32□□□□□ -1.88
SLC9A3P48764 AC011602.1-201ENST00000546484 331 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 CCNG2P1-201ENST00000549521 1000 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 OR4H12P-201ENST00000556269 907 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC9A3P48764 ZNF519P3-201ENST00000557158 1032 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC9A3P48764 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC9A3P48764 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC9A3P48764 MIR5187-201ENST00000583479 76 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC083760.1-201ENST00000589621 670 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AL590392.1-201ENST00000604960 446 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC106900.2-201ENST00000604994 317 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC004067.1-201ENST00000608733 700 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC004908.3-201ENST00000610248 625 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC9A3P48764 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 MIR6875-201ENST00000617506 72 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 MIR6130-201ENST00000619419 109 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AL161637.1-201ENST00000622380 412 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AC244258.1-201ENST00000637553 1071 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AP004289.2-201ENST00000444413 1457 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 AL513302.2-201ENST00000562313 1842 ntBASIC3.32□□□□□ -1.88
SLC9A3P48764 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
SLC9A3P48764 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC9A3P48764 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC9A3P48764 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC9A3P48764 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC9A3P48764 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC9A3P48764 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC9A3P48764 MTND4P4-201ENST00000439033 1366 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC9A3P48764 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC9A3P48764 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 SNORD116-1-201ENST00000384335 95 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 RNU6-628P-201ENST00000410675 107 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 YPEL5P1-201ENST00000419731 367 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC9A3P48764 AC233728.2-201ENST00000425348 757 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AL356583.2-201ENST00000426536 280 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 RSL24D1P6-201ENST00000426934 401 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 RPL23AP69-201ENST00000431134 458 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC9A3P48764 HMGN2P20-201ENST00000437531 273 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 RPL22P17-201ENST00000438729 315 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC9A3P48764 AP000936.2-201ENST00000447151 681 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC9A3P48764 AC010401.1-201ENST00000463867 348 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 FTH1P2-201ENST00000466086 412 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AC116337.2-201ENST00000477662 156 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 FCF1P3-201ENST00000496394 590 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AC080014.1-201ENST00000496877 1201 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC9A3P48764 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC9A3P48764 IGKV2D-19-201ENST00000523346 262 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 DEFB108D-201ENST00000527787 222 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC9A3P48764 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC9A3P48764 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC9A3P48764 AC123904.2-201ENST00000548059 300 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC9A3P48764 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC9A3P48764 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC9A3P48764 AC136624.4-201ENST00000573044 370 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AP005136.1-201ENST00000579765 429 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.31□□□□□ -1.88
SLC9A3P48764 AP001981.2-201ENST00000603241 418 ntBASIC3.31□□□□□ -1.88
SLC9A3P48764 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms